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The map label for this gene is 187930523

Identifier: 187930523

GI number: 187930523

Start: 3617508

End: 3617855

Strand: Reverse

Name: 187930523

Synonym: Rpic_3458

Alternate gene names: NA

Gene position: 3617855-3617508 (Counterclockwise)

Preceding gene: 187930524

Following gene: 187930522

Centisome position: 91.76

GC content: 68.97

Gene sequence:

>348_bases
ATGAAGTTCGCCCCCACGCTCGCGGCTGCGGCGGTGCTGGCCGGCCTGGCGCTGTCCGCCACGCCCGCCCTGGCTGCCGT
TGATGCTGCCCGCGCCTTGTCCATCGCCAACCAGAACGCCTGCATGGGCTGCCACGCCGTCGACCGCAAGCTCGTCGGCC
CGGCCTACCAGGACGTTGCCGCCAAGTACAAGGGCGATGCCGGCGCGCAAGCCAAGCTCATCAAGAAGGTGCGCGAAGGC
GGCATGGGCAACTGGGGCCAGATCCCGATGCCGGCCAACCCGAAGATTGCCGATGCCGATCTGAAAACCGTGATCGACTG
GGTGCTCGCGGGCGCCCCGGCCAAGTGA

Upstream 100 bases:

>100_bases
GGCGACATAGGATTTGGCCTGTTTCGGGCACAATACCGGGTCCGATTCCCGCCATTTCGCCCGCACACGCATGCGGGCAG
CCTCGTCTTCTGGAGACCAC

Downstream 100 bases:

>100_bases
GGAACGGACGATGAACGACGCAATCAACCTGGGCCGCCGCGACGTGCTGCGCGCCGGCGCCATGATGGCACTGCTGGTGT
CCGCCGGCATTGCCACGCCG

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c551; Cytochrome c8 [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKFAPTLAAAAVLAGLALSATPALAAVDAARALSIANQNACMGCHAVDRKLVGPAYQDVAAKYKGDAGAQAKLIKKVREG
GMGNWGQIPMPANPKIADADLKTVIDWVLAGAPAK

Sequences:

>Translated_115_residues
MKFAPTLAAAAVLAGLALSATPALAAVDAARALSIANQNACMGCHAVDRKLVGPAYQDVAAKYKGDAGAQAKLIKKVREG
GMGNWGQIPMPANPKIADADLKTVIDWVLAGAPAK
>Mature_115_residues
MKFAPTLAAAAVLAGLALSATPALAAVDAARALSIANQNACMGCHAVDRKLVGPAYQDVAAKYKGDAGAQAKLIKKVREG
GMGNWGQIPMPANPKIADADLKTVIDWVLAGAPAK

Specific function: Efficiently couple electron transfer between the cytochrome bc1 complex and the photosynthetic reaction center [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11666; Mature: 11666

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAPTLAAAAVLAGLALSATPALAAVDAARALSIANQNACMGCHAVDRKLVGPAYQDVA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
AKYKGDAGAQAKLIKKVREGGMGNWGQIPMPANPKIADADLKTVIDWVLAGAPAK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFAPTLAAAAVLAGLALSATPALAAVDAARALSIANQNACMGCHAVDRKLVGPAYQDVA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
AKYKGDAGAQAKLIKKVREGGMGNWGQIPMPANPKIADADLKTVIDWVLAGAPAK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8612646 [H]