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The map label for this gene is 187930518

Identifier: 187930518

GI number: 187930518

Start: 3614705

End: 3615367

Strand: Reverse

Name: 187930518

Synonym: Rpic_3453

Alternate gene names: NA

Gene position: 3615367-3614705 (Counterclockwise)

Preceding gene: 187930519

Following gene: 187930517

Centisome position: 91.7

GC content: 65.16

Gene sequence:

>663_bases
ATGACCCGACTGACCCCCATCGTTCTGACGGCGCTGACACTGGCCCTGGCTGCCGGCACGGCGCACGCAGCGGACGCCAC
CGCCAAGGGCGTAACCGCACCCAAGCCCGATGCCAAGGCCGACGCGGCACTCGCCAAGGCCATCCACGAGAGCTTTGTCT
CCAAAGGCCCGGCCACCGTCGAAGGCGTGACCGACCGCGACGACGTGCAGAAGATCTGCAGCCAGTTTGCCGACCGCAAC
GCCGTGCCCGCAGCAGTTGCCAAGAAGCTGGAAGACGCGCAATTCAAGACCATCCACTACCCGGCTGACAACACCTGGCT
GGGCGACTGGAAGGAAGGCGAGAAGACCGCGCAGAGCGGCCGCGGCATGCAGTTTTCCGACCCGGCCGGCGGCGCGAACG
GTGCCAACTGCTATGCCTGCCACCGCCTGTCGAAAGACGAAGTGTCGTACGGCACCATCGGCCCGTCGCTGTACCAGTAC
GGCAAGCTGCGCGGCGATTCTGAGGCGATCCTGCGCTACACGTGGGGCAAGATCTACAACTCCAACGCGTATGCGGCGTG
CTCCAACATGCCGCGCTTCGGGCACAAGGGCATCCTGACCGAGCAGCAGATTCGCGATGTGATGGCGCTGTTGTTCGACC
CGGCCTCGCCCGTGAACCAGTAA

Upstream 100 bases:

>100_bases
AGCGAGGTGATTACCGCGCTGGAGATGTTCCTCGCCCGCAACGCCAACGGCGGCAAGATGGACGCGCCGTCCATCAAACG
ATGACACGATGAGGCCACGC

Downstream 100 bases:

>100_bases
CGCCATGCGTACGCTTCGACGGTTCCTGATGTGGACGGCGGCAATGGTGCTCGTTGCCAGCACCGCGCAGGCCGTCGAAG
TGGGCGACGTGGCGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTRLTPIVLTALTLALAAGTAHAADATAKGVTAPKPDAKADAALAKAIHESFVSKGPATVEGVTDRDDVQKICSQFADRN
AVPAAVAKKLEDAQFKTIHYPADNTWLGDWKEGEKTAQSGRGMQFSDPAGGANGANCYACHRLSKDEVSYGTIGPSLYQY
GKLRGDSEAILRYTWGKIYNSNAYAACSNMPRFGHKGILTEQQIRDVMALLFDPASPVNQ

Sequences:

>Translated_220_residues
MTRLTPIVLTALTLALAAGTAHAADATAKGVTAPKPDAKADAALAKAIHESFVSKGPATVEGVTDRDDVQKICSQFADRN
AVPAAVAKKLEDAQFKTIHYPADNTWLGDWKEGEKTAQSGRGMQFSDPAGGANGANCYACHRLSKDEVSYGTIGPSLYQY
GKLRGDSEAILRYTWGKIYNSNAYAACSNMPRFGHKGILTEQQIRDVMALLFDPASPVNQ
>Mature_219_residues
TRLTPIVLTALTLALAAGTAHAADATAKGVTAPKPDAKADAALAKAIHESFVSKGPATVEGVTDRDDVQKICSQFADRNA
VPAAVAKKLEDAQFKTIHYPADNTWLGDWKEGEKTAQSGRGMQFSDPAGGANGANCYACHRLSKDEVSYGTIGPSLYQYG
KLRGDSEAILRYTWGKIYNSNAYAACSNMPRFGHKGILTEQQIRDVMALLFDPASPVNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23493; Mature: 23361

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLTPIVLTALTLALAAGTAHAADATAKGVTAPKPDAKADAALAKAIHESFVSKGPATV
CCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGVTDRDDVQKICSQFADRNAVPAAVAKKLEDAQFKTIHYPADNTWLGDWKEGEKTAQSG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHC
RGMQFSDPAGGANGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDSEAILRYTWGKIYN
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SNAYAACSNMPRFGHKGILTEQQIRDVMALLFDPASPVNQ
CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRLTPIVLTALTLALAAGTAHAADATAKGVTAPKPDAKADAALAKAIHESFVSKGPATV
CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGVTDRDDVQKICSQFADRNAVPAAVAKKLEDAQFKTIHYPADNTWLGDWKEGEKTAQSG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHC
RGMQFSDPAGGANGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDSEAILRYTWGKIYN
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SNAYAACSNMPRFGHKGILTEQQIRDVMALLFDPASPVNQ
CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]