| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930507
Identifier: 187930507
GI number: 187930507
Start: 3604940
End: 3605374
Strand: Reverse
Name: 187930507
Synonym: Rpic_3442
Alternate gene names: NA
Gene position: 3605374-3604940 (Counterclockwise)
Preceding gene: 187930508
Following gene: 187930506
Centisome position: 91.45
GC content: 58.39
Gene sequence:
>435_bases ATGCCGCGAAAACTCAGTGTCTTTTTGATTGCGGCGGTCTGCGTCATCGCGCACGCCGAAGAGGCGGAGCAACCAGCATG GCGCGCCAAACCTCAGGCATACGCCACAGTCAACAATATCTTCGCGACGCGCGAGCCATTCAATCGGGCACTTGTTGTTG ACCAAGCGTTTGTAGAACCGACGCCCGACAAGGGGCTACGTTTCTGGTTTCGCGTCTATGGCCCCAACTACCGCGTTTAC TCTGAAGCGGGCGATGCGAAAAAAATCGCCGAGGGGATGTACCGCTACACCGGAAACGGAGAAACGACTTGCGACCTGCT GTTCCGGCTCTCGCCCTTGCGTACCCTTCGCATCCAAGGCGTGCCGACGCCCGACGGTAACCAAGGCGGCGCCCGATTCT GCCCCACCGCAATCACTCTATCCTTCAAGCCATAA
Upstream 100 bases:
>100_bases TCAGCTGTTCGCACACGCCCAGCAGCCCCCGCTGGCGACGCCGATCAAGGTTTCGGCGATCGACTGAGGTCACATGGCTG CCTTGCTGGAAGACTAACAA
Downstream 100 bases:
>100_bases ATGACCACAAGGAGAACCGCATGATCAAAGTGACCGTGATGTACCCCTACGCCGAAGGCGCACGCTTCGACCACGACTAT TACCGCGAACGCCACATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPRKLSVFLIAAVCVIAHAEEAEQPAWRAKPQAYATVNNIFATREPFNRALVVDQAFVEPTPDKGLRFWFRVYGPNYRVY SEAGDAKKIAEGMYRYTGNGETTCDLLFRLSPLRTLRIQGVPTPDGNQGGARFCPTAITLSFKP
Sequences:
>Translated_144_residues MPRKLSVFLIAAVCVIAHAEEAEQPAWRAKPQAYATVNNIFATREPFNRALVVDQAFVEPTPDKGLRFWFRVYGPNYRVY SEAGDAKKIAEGMYRYTGNGETTCDLLFRLSPLRTLRIQGVPTPDGNQGGARFCPTAITLSFKP >Mature_143_residues PRKLSVFLIAAVCVIAHAEEAEQPAWRAKPQAYATVNNIFATREPFNRALVVDQAFVEPTPDKGLRFWFRVYGPNYRVYS EAGDAKKIAEGMYRYTGNGETTCDLLFRLSPLRTLRIQGVPTPDGNQGGARFCPTAITLSFKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16086; Mature: 15954
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKLSVFLIAAVCVIAHAEEAEQPAWRAKPQAYATVNNIFATREPFNRALVVDQAFVEP CCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHEECCCCCCEEEEEEHHHCCC TPDKGLRFWFRVYGPNYRVYSEAGDAKKIAEGMYRYTGNGETTCDLLFRLSPLRTLRIQG CCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHEEECCCCCCHHHHEEECCCCEEEEEEC VPTPDGNQGGARFCPTAITLSFKP CCCCCCCCCCCEECCEEEEEEECC >Mature Secondary Structure PRKLSVFLIAAVCVIAHAEEAEQPAWRAKPQAYATVNNIFATREPFNRALVVDQAFVEP CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHEECCCCCCEEEEEEHHHCCC TPDKGLRFWFRVYGPNYRVYSEAGDAKKIAEGMYRYTGNGETTCDLLFRLSPLRTLRIQG CCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHEEECCCCCCHHHHEEECCCCEEEEEEC VPTPDGNQGGARFCPTAITLSFKP CCCCCCCCCCCEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA