Click here to switch to the map view.

The map label for this gene is 187930501

Identifier: 187930501

GI number: 187930501

Start: 3600200

End: 3600916

Strand: Reverse

Name: 187930501

Synonym: Rpic_3435

Alternate gene names: NA

Gene position: 3600916-3600200 (Counterclockwise)

Preceding gene: 187930502

Following gene: 187930500

Centisome position: 91.33

GC content: 61.51

Gene sequence:

>717_bases
ATGCGACTGAACCGGCAATCGGTGGGCAGGGTGATGTTGTGTCTCTTCTGCGCAGGCGGCTTGTGGGCAACGCAGGCCAG
TGCCCAGGAGGGCGCGATTGCGTTGCGCGCCGACAGCGAAATGCCACTGAACAAGCCGGTCAAGAGCATGGCGGAGCTGC
GCTATCGCAGTGTGATGCGACAGCAGCAGGATTTCAGTTGCGGGGCGGCTGCGGTTGGCACGTTGCTGCGCTACGGCTAT
GGCTTGGACATCGATGAGCGCCGCGTCATTGCCGACATGATGAAAGTGAGCGACCCGAAGCAGGTCGCCGAGCAAGGGTT
CTCCATGCTCGATATGCGCAACTATGTGCAGACACTCGGCTTTCGGGGCCGTGGCTACCGTGTGGACATGGCGGCATTAC
GCGATCTGGCGATCCCGGTGATCGTCTTGTTGAGCTTGAACGGGTACCAACATTTCGTGGTCGTCAAGCGCGCGGCCCAG
GGGCGGGTGTTTATCGCCGACCCCGCACTGGGCAATCGCATCATGCAGGAGTGGGAATTTGCGCCTGCGTGGAATGGCCT
CGTATTTGCAATCGTCGGCGACGTGTCGGTCCAGGCCGATTCCGGATTGCTGCAGACGAATGCTCCCAGCTTGCGCGCGC
GTGAGAACGCCGCGTTCTCGGGAGGGATGCTGCCGATCCAGATGGAATTTGGACCTGCCCGGTGGGACCTGTTCTGA

Upstream 100 bases:

>100_bases
CCTGGCAATCGCCACGGCCAAGGCCGCCAACTAAGGCTAGCGTCCAAACACCCGGCCGCTGCTCCGGCGGTCGGGTGTCC
GTTCCCCAAGGGGGGGATTC

Downstream 100 bases:

>100_bases
TGAAAACCAAGACACTCGCATGGATGCTGCCGCTCGCGTATGCCGGCTGGTGTGCCGGAGCCAGCGCCGGGCCGCTCCCT
GATCCTTCCGCGCCGGCCGA

Product: peptidase C39 bacteriocin processing

Products: NA

Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MRLNRQSVGRVMLCLFCAGGLWATQASAQEGAIALRADSEMPLNKPVKSMAELRYRSVMRQQQDFSCGAAAVGTLLRYGY
GLDIDERRVIADMMKVSDPKQVAEQGFSMLDMRNYVQTLGFRGRGYRVDMAALRDLAIPVIVLLSLNGYQHFVVVKRAAQ
GRVFIADPALGNRIMQEWEFAPAWNGLVFAIVGDVSVQADSGLLQTNAPSLRARENAAFSGGMLPIQMEFGPARWDLF

Sequences:

>Translated_238_residues
MRLNRQSVGRVMLCLFCAGGLWATQASAQEGAIALRADSEMPLNKPVKSMAELRYRSVMRQQQDFSCGAAAVGTLLRYGY
GLDIDERRVIADMMKVSDPKQVAEQGFSMLDMRNYVQTLGFRGRGYRVDMAALRDLAIPVIVLLSLNGYQHFVVVKRAAQ
GRVFIADPALGNRIMQEWEFAPAWNGLVFAIVGDVSVQADSGLLQTNAPSLRARENAAFSGGMLPIQMEFGPARWDLF
>Mature_238_residues
MRLNRQSVGRVMLCLFCAGGLWATQASAQEGAIALRADSEMPLNKPVKSMAELRYRSVMRQQQDFSCGAAAVGTLLRYGY
GLDIDERRVIADMMKVSDPKQVAEQGFSMLDMRNYVQTLGFRGRGYRVDMAALRDLAIPVIVLLSLNGYQHFVVVKRAAQ
GRVFIADPALGNRIMQEWEFAPAWNGLVFAIVGDVSVQADSGLLQTNAPSLRARENAAFSGGMLPIQMEFGPARWDLF

Specific function: Unknown

COG id: COG3271

COG function: function code R; Predicted double-glycine peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26314; Mature: 26314

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50990 PEPTIDASE_C39

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNRQSVGRVMLCLFCAGGLWATQASAQEGAIALRADSEMPLNKPVKSMAELRYRSVMR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
QQQDFSCGAAAVGTLLRYGYGLDIDERRVIADMMKVSDPKQVAEQGFSMLDMRNYVQTLG
HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHC
FRGRGYRVDMAALRDLAIPVIVLLSLNGYQHFVVVKRAAQGRVFIADPALGNRIMQEWEF
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHCC
APAWNGLVFAIVGDVSVQADSGLLQTNAPSLRARENAAFSGGMLPIQMEFGPARWDLF
CCCCCCEEEEEEECEEEECCCCEEECCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRLNRQSVGRVMLCLFCAGGLWATQASAQEGAIALRADSEMPLNKPVKSMAELRYRSVMR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
QQQDFSCGAAAVGTLLRYGYGLDIDERRVIADMMKVSDPKQVAEQGFSMLDMRNYVQTLG
HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHC
FRGRGYRVDMAALRDLAIPVIVLLSLNGYQHFVVVKRAAQGRVFIADPALGNRIMQEWEF
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHCC
APAWNGLVFAIVGDVSVQADSGLLQTNAPSLRARENAAFSGGMLPIQMEFGPARWDLF
CCCCCCEEEEEEECEEEECCCCEEECCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA