| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930500
Identifier: 187930500
GI number: 187930500
Start: 3599394
End: 3600200
Strand: Reverse
Name: 187930500
Synonym: Rpic_3434
Alternate gene names: NA
Gene position: 3600200-3599394 (Counterclockwise)
Preceding gene: 187930501
Following gene: 187930499
Centisome position: 91.32
GC content: 66.54
Gene sequence:
>807_bases ATGAAAACCAAGACACTCGCATGGATGCTGCCGCTCGCGTATGCCGGCTGGTGTGCCGGAGCCAGCGCCGGGCCGCTCCC TGATCCTTCCGCGCCGGCCGAAGCGCACGACAGTGCCGTGCTGTTTCATTCCGGCACCGCAGTCGAGCTGGCCGATGACG GCGAGCTGGCCCAGCAGCGCGGCAAATACCTCGGCGCCAGCATCGTCAGCGGATTCATGATTGAAATGGCCTCGCAATGG CGCAACGAAGCAGGGCAGGCAGCGGCCGAAGCGCGGATGCTCGCCACCAACCTGCGCACCAGTACCGCCAGCGTCGCAGT GAGCACACTGGCGTCGGTGCAGATGGGCATGGGTGCTCTGGCGGGCGCCGCACCCGGGGCGACAGCCTCCGGCGGGGCCG GTGTACAGGTCAACGGTGTCGGCCAGGTGACACAGGTGGCTGGCAACAACAATCTGGCGAGTAACACCACATCGATCTCG ATGCAGGCCGCTCCATTGCCTACACTGCCTTCGGGCAGCGCGTTGGCAACGGCGGCGCAGAACGGATTCACCGCCCAGGC CCAGGTGGGCGCGGGCGGCGTGCAGGTTGCCATCACCAGCCCGATGGGCGTCGTCTCGCAGTCGGTGACGCCCAATCTGG CCGGGGCGGCGGGGAGCGTGATGCAGGTGGCGCAAATGGCGGGCAATGCGCAGTTGATTGCCAATCAGTTGTCGATCCAA CTGCAGATGCAGACGATGTCGCGTCAGCAGCTGGCTCAGATCGGCGTGGCGCAGGCATTGCAGGCGGTGGCGGGTTTACG CCGCTAG
Upstream 100 bases:
>100_bases CGAATGCTCCCAGCTTGCGCGCGCGTGAGAACGCCGCGTTCTCGGGAGGGATGCTGCCGATCCAGATGGAATTTGGACCT GCCCGGTGGGACCTGTTCTG
Downstream 100 bases:
>100_bases ACGTGCCGATGCAGAATTCCCTATAACGACGCAATAAAAGAACACACAGGCAGGCAGTGAGAGGCGGCGCCCGGCAATAG GGCCGGTGCGCTGAAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKTKTLAWMLPLAYAGWCAGASAGPLPDPSAPAEAHDSAVLFHSGTAVELADDGELAQQRGKYLGASIVSGFMIEMASQW RNEAGQAAAEARMLATNLRTSTASVAVSTLASVQMGMGALAGAAPGATASGGAGVQVNGVGQVTQVAGNNNLASNTTSIS MQAAPLPTLPSGSALATAAQNGFTAQAQVGAGGVQVAITSPMGVVSQSVTPNLAGAAGSVMQVAQMAGNAQLIANQLSIQ LQMQTMSRQQLAQIGVAQALQAVAGLRR
Sequences:
>Translated_268_residues MKTKTLAWMLPLAYAGWCAGASAGPLPDPSAPAEAHDSAVLFHSGTAVELADDGELAQQRGKYLGASIVSGFMIEMASQW RNEAGQAAAEARMLATNLRTSTASVAVSTLASVQMGMGALAGAAPGATASGGAGVQVNGVGQVTQVAGNNNLASNTTSIS MQAAPLPTLPSGSALATAAQNGFTAQAQVGAGGVQVAITSPMGVVSQSVTPNLAGAAGSVMQVAQMAGNAQLIANQLSIQ LQMQTMSRQQLAQIGVAQALQAVAGLRR >Mature_268_residues MKTKTLAWMLPLAYAGWCAGASAGPLPDPSAPAEAHDSAVLFHSGTAVELADDGELAQQRGKYLGASIVSGFMIEMASQW RNEAGQAAAEARMLATNLRTSTASVAVSTLASVQMGMGALAGAAPGATASGGAGVQVNGVGQVTQVAGNNNLASNTTSIS MQAAPLPTLPSGSALATAAQNGFTAQAQVGAGGVQVAITSPMGVVSQSVTPNLAGAAGSVMQVAQMAGNAQLIANQLSIQ LQMQTMSRQQLAQIGVAQALQAVAGLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26615; Mature: 26615
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKTLAWMLPLAYAGWCAGASAGPLPDPSAPAEAHDSAVLFHSGTAVELADDGELAQQR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHH GKYLGASIVSGFMIEMASQWRNEAGQAAAEARMLATNLRTSTASVAVSTLASVQMGMGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AGAAPGATASGGAGVQVNGVGQVTQVAGNNNLASNTTSISMQAAPLPTLPSGSALATAAQ HCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHC NGFTAQAQVGAGGVQVAITSPMGVVSQSVTPNLAGAAGSVMQVAQMAGNAQLIANQLSIQ CCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHEEEHHHEEE LQMQTMSRQQLAQIGVAQALQAVAGLRR EEHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTKTLAWMLPLAYAGWCAGASAGPLPDPSAPAEAHDSAVLFHSGTAVELADDGELAQQR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHH GKYLGASIVSGFMIEMASQWRNEAGQAAAEARMLATNLRTSTASVAVSTLASVQMGMGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AGAAPGATASGGAGVQVNGVGQVTQVAGNNNLASNTTSISMQAAPLPTLPSGSALATAAQ HCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHC NGFTAQAQVGAGGVQVAITSPMGVVSQSVTPNLAGAAGSVMQVAQMAGNAQLIANQLSIQ CCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHEEEHHHEEE LQMQTMSRQQLAQIGVAQALQAVAGLRR EEHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA