| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930499
Identifier: 187930499
GI number: 187930499
Start: 3597940
End: 3599256
Strand: Reverse
Name: 187930499
Synonym: Rpic_3433
Alternate gene names: NA
Gene position: 3599256-3597940 (Counterclockwise)
Preceding gene: 187930500
Following gene: 187930495
Centisome position: 91.29
GC content: 62.87
Gene sequence:
>1317_bases ATGGGACACCGACGCACGGCAGTGGCGTGGGCAGTGGCATGTTGGTTGTTGCTTCCTGCGGCGGCCGAAGCGCAATCGGC ACCGGCTGCCGCAGACTCCTTTGACGCGCGCCTGGCGCGCCTGCAGCGCATCATCGAGCGGCAGCAGAAGATCATTGATG CATTGGAAGAGCGCGTCGGCGACCTGGAGCTGGTGCGCGTGCGCGGGCGTGGCGTTGGTGCCAGCAACGCACAGGCATCC GCTGCGGGCGCAACCACGGCAACACAATCGCCGTCGTCTGCGCTGGTCGCCCAATCCGGCAACACGGCGCCTGCGTCGGA AAGCACAACCGCCGCCCGCCCCGACCCCAACGACAAGCCTCGCATCCAGAGCAAGGACCTTGTCTTTCAATCCGAGCACG CGCCGCTGTTTGAGCGACGTTTCACAATCGATACCGGCATCAGCTACAGCTACTACGACCGCCGCAACCTCGCGCTGTCG GGCTTTCTGGCGCTGGATGCGATCTTTCTCGGGCAGATCAACCTGGTCCAGACCAAGGCCAATGTCACGACCTTCGACGT CACCGGCCGCTATGGCTTCAGCGATCGGCTGAGCGCGGATTTCACAGTGCCGGCCGTGTATCGCTCCAGCACGTTCTTCA GCGGCGGTGCGGGTGGGGCATCGAGCACCGTCAGCGAGGCAGACAAGACGTCCGCGGGCTTGGGCGATGTGAGTGCCGGC ATCTACTATCAGCTCGTCAAAGAGTCAGCGGATTTGCCGGACATTGTCGGCAGCTTTCGCGTGCGTGCACCGACCGGGCG TTCACCGTTTGGCATCAAGCTGATCCATGCCGACAGCAATAACAACAACCTGATCATCGACCAGCAACTGCCGACCGGCA ACGGTGTCTGGAGCGGCACGCTGGGCATGTCTTTCCTGAAGACGTACGACCCGGTGGTGTTGTTTGCCAATGCCAGCTAC ACGTACTACGTGCCGCGCTCGTTTGCTGACATCTCCTCGACCGAAGGCGTGGTGCAGCCGGGCAAGGTCAAGCTGGGCGA TACCATCACCTTGGGCGGAGGCCTTGCATTGGCGCTGAACGACCGCACGGCGCTGACGATGGCTTACAGCACCGCATTCT CCGGCAACACGCGCATCACCCCAGAGGGTGGCGCCGAACAGTCGGTGGTGGGCAGCAAAACCAACGTAGGCACGATGACG TTCGGGATCAGCCATGTGCTGACCAAGAACTTGTCGATCAGCGCCACGCTGGCCATGGGCCTGACGCCGGACGCGCCGAA CTACGTCTTTACGCTTCGCTTCCCGTACACGTGGTAG
Upstream 100 bases:
>100_bases AAGAACACACAGGCAGGCAGTGAGAGGCGGCGCCCGGCAATAGGGCCGGTGCGCTGAAATGGAGGCTCTTCAGCCTCCGC CTTGCTTTCCGGGGGGAAAC
Downstream 100 bases:
>100_bases CGCAGGGGTTGTGGCGCCCGGCAGACGGCAAGGCGTGGCGTAGGTGGAGCGAACGGCAACGCAACGAACGCGCCTGAGCG CCGGGTGTTCTGCCTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQAS AAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALS GFLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASY TYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMT FGISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW
Sequences:
>Translated_438_residues MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQAS AAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALS GFLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASY TYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMT FGISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW >Mature_437_residues GHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQASA AGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSG FLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAGI YYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASYT YYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTF GISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46442; Mature: 46310
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVG CCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DLELVRVRGRGVGASNAQASAAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKP CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC RIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSGFLALDAIFLGQINLVQTKA CCCCCCEEEECCCCCHHHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHCCEEEEEEEC NVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG CEEEEEECCCCCCCCCCCCCEEECEEEECCCEECCCCCCCCCHHHHHHHCCCCCCCCHHH IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGT HHHHHHHHCCCCCHHHHCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECH LGMSFLKTYDPVVLFANASYTYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALN HHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCEEEEEC DRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTFGISHVLTKNLSISATLAMG CCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEEEC LTPDAPNYVFTLRFPYTW CCCCCCCEEEEEECCCCC >Mature Secondary Structure GHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVG CCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DLELVRVRGRGVGASNAQASAAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKP CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC RIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSGFLALDAIFLGQINLVQTKA CCCCCCEEEECCCCCHHHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHCCEEEEEEEC NVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG CEEEEEECCCCCCCCCCCCCEEECEEEECCCEECCCCCCCCCHHHHHHHCCCCCCCCHHH IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGT HHHHHHHHCCCCCHHHHCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECH LGMSFLKTYDPVVLFANASYTYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALN HHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCEEEEEC DRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTFGISHVLTKNLSISATLAMG CCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEEEC LTPDAPNYVFTLRFPYTW CCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA