Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187930499

Identifier: 187930499

GI number: 187930499

Start: 3597940

End: 3599256

Strand: Reverse

Name: 187930499

Synonym: Rpic_3433

Alternate gene names: NA

Gene position: 3599256-3597940 (Counterclockwise)

Preceding gene: 187930500

Following gene: 187930495

Centisome position: 91.29

GC content: 62.87

Gene sequence:

>1317_bases
ATGGGACACCGACGCACGGCAGTGGCGTGGGCAGTGGCATGTTGGTTGTTGCTTCCTGCGGCGGCCGAAGCGCAATCGGC
ACCGGCTGCCGCAGACTCCTTTGACGCGCGCCTGGCGCGCCTGCAGCGCATCATCGAGCGGCAGCAGAAGATCATTGATG
CATTGGAAGAGCGCGTCGGCGACCTGGAGCTGGTGCGCGTGCGCGGGCGTGGCGTTGGTGCCAGCAACGCACAGGCATCC
GCTGCGGGCGCAACCACGGCAACACAATCGCCGTCGTCTGCGCTGGTCGCCCAATCCGGCAACACGGCGCCTGCGTCGGA
AAGCACAACCGCCGCCCGCCCCGACCCCAACGACAAGCCTCGCATCCAGAGCAAGGACCTTGTCTTTCAATCCGAGCACG
CGCCGCTGTTTGAGCGACGTTTCACAATCGATACCGGCATCAGCTACAGCTACTACGACCGCCGCAACCTCGCGCTGTCG
GGCTTTCTGGCGCTGGATGCGATCTTTCTCGGGCAGATCAACCTGGTCCAGACCAAGGCCAATGTCACGACCTTCGACGT
CACCGGCCGCTATGGCTTCAGCGATCGGCTGAGCGCGGATTTCACAGTGCCGGCCGTGTATCGCTCCAGCACGTTCTTCA
GCGGCGGTGCGGGTGGGGCATCGAGCACCGTCAGCGAGGCAGACAAGACGTCCGCGGGCTTGGGCGATGTGAGTGCCGGC
ATCTACTATCAGCTCGTCAAAGAGTCAGCGGATTTGCCGGACATTGTCGGCAGCTTTCGCGTGCGTGCACCGACCGGGCG
TTCACCGTTTGGCATCAAGCTGATCCATGCCGACAGCAATAACAACAACCTGATCATCGACCAGCAACTGCCGACCGGCA
ACGGTGTCTGGAGCGGCACGCTGGGCATGTCTTTCCTGAAGACGTACGACCCGGTGGTGTTGTTTGCCAATGCCAGCTAC
ACGTACTACGTGCCGCGCTCGTTTGCTGACATCTCCTCGACCGAAGGCGTGGTGCAGCCGGGCAAGGTCAAGCTGGGCGA
TACCATCACCTTGGGCGGAGGCCTTGCATTGGCGCTGAACGACCGCACGGCGCTGACGATGGCTTACAGCACCGCATTCT
CCGGCAACACGCGCATCACCCCAGAGGGTGGCGCCGAACAGTCGGTGGTGGGCAGCAAAACCAACGTAGGCACGATGACG
TTCGGGATCAGCCATGTGCTGACCAAGAACTTGTCGATCAGCGCCACGCTGGCCATGGGCCTGACGCCGGACGCGCCGAA
CTACGTCTTTACGCTTCGCTTCCCGTACACGTGGTAG

Upstream 100 bases:

>100_bases
AAGAACACACAGGCAGGCAGTGAGAGGCGGCGCCCGGCAATAGGGCCGGTGCGCTGAAATGGAGGCTCTTCAGCCTCCGC
CTTGCTTTCCGGGGGGAAAC

Downstream 100 bases:

>100_bases
CGCAGGGGTTGTGGCGCCCGGCAGACGGCAAGGCGTGGCGTAGGTGGAGCGAACGGCAACGCAACGAACGCGCCTGAGCG
CCGGGTGTTCTGCCTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQAS
AAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALS
GFLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG
IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASY
TYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMT
FGISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW

Sequences:

>Translated_438_residues
MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQAS
AAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALS
GFLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG
IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASY
TYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMT
FGISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW
>Mature_437_residues
GHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVGDLELVRVRGRGVGASNAQASA
AGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKPRIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSG
FLALDAIFLGQINLVQTKANVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAGI
YYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGTLGMSFLKTYDPVVLFANASYT
YYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALNDRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTF
GISHVLTKNLSISATLAMGLTPDAPNYVFTLRFPYTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46442; Mature: 46310

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVG
CCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLELVRVRGRGVGASNAQASAAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKP
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
RIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSGFLALDAIFLGQINLVQTKA
CCCCCCEEEECCCCCHHHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHCCEEEEEEEC
NVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG
CEEEEEECCCCCCCCCCCCCEEECEEEECCCEECCCCCCCCCHHHHHHHCCCCCCCCHHH
IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGT
HHHHHHHHCCCCCHHHHCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECH
LGMSFLKTYDPVVLFANASYTYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALN
HHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCEEEEEC
DRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTFGISHVLTKNLSISATLAMG
CCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEEEC
LTPDAPNYVFTLRFPYTW
CCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
GHRRTAVAWAVACWLLLPAAAEAQSAPAAADSFDARLARLQRIIERQQKIIDALEERVG
CCCHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLELVRVRGRGVGASNAQASAAGATTATQSPSSALVAQSGNTAPASESTTAARPDPNDKP
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
RIQSKDLVFQSEHAPLFERRFTIDTGISYSYYDRRNLALSGFLALDAIFLGQINLVQTKA
CCCCCCEEEECCCCCHHHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHCCEEEEEEEC
NVTTFDVTGRYGFSDRLSADFTVPAVYRSSTFFSGGAGGASSTVSEADKTSAGLGDVSAG
CEEEEEECCCCCCCCCCCCCEEECEEEECCCEECCCCCCCCCHHHHHHHCCCCCCCCHHH
IYYQLVKESADLPDIVGSFRVRAPTGRSPFGIKLIHADSNNNNLIIDQQLPTGNGVWSGT
HHHHHHHHCCCCCHHHHCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECH
LGMSFLKTYDPVVLFANASYTYYVPRSFADISSTEGVVQPGKVKLGDTITLGGGLALALN
HHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEECCCEEEEEC
DRTALTMAYSTAFSGNTRITPEGGAEQSVVGSKTNVGTMTFGISHVLTKNLSISATLAMG
CCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEEEC
LTPDAPNYVFTLRFPYTW
CCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA