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The map label for this gene is 187930468

Identifier: 187930468

GI number: 187930468

Start: 3563007

End: 3563690

Strand: Reverse

Name: 187930468

Synonym: Rpic_3402

Alternate gene names: NA

Gene position: 3563690-3563007 (Counterclockwise)

Preceding gene: 187930471

Following gene: 187930456

Centisome position: 90.39

GC content: 66.23

Gene sequence:

>684_bases
GTGTCCACCACGGAATCCACATCGCCCACCGCACGCACCCGCGTGCGCCGCGTCGCGCACCGCGGCCACTACGACCGCAC
CACGCTGCACGCCATCCTCGACGAGGCTTACGTCTGCCACATCGCCTTCGCCGACGAGCATGGTGTGCACTGCATCCCGA
CCGCGTGCTGGCGCGAGGGCGGTCATCTCTACATCCACGGTTCCAACGGCAGCCGCATGCTCAAGCTGGCAGGCAGCGGT
GCGCAGGTCTGCGTGACCATCACGCACATCGACGGCCTGGTGCTGGCGCGCTCGGCGTTCAACCATTCCATGAATTACCG
CTCGGCCGTCATCTACGGTGCGTTCGAAGTTGTGCCCGATGCGCAGAAAGCTGGGGTGCTCGATACCTTCATGGAAGTGC
TCGCGCCTGGCCGTTCGCGACAGGCGCGGCCCGGCAATGCCAAGGAACTCGCTGCCACGACCGTGCTGCGCATTCCGCTG
GATGAAGCGGCGTGCAAAGTGCGCACGGGCGGGCCGAAGGATGATGCTGAAGACCTTGACTTGCCTGTGTGGGCTGGGGT
GCTGCCGATGGCGCTGTTGCCGTTGCCGCCGGTGGTGGAGGCCGCGCCGGCGGGTACGCCTGACTATGTGCAGGAGTGGA
GGGATAGTACGCGGGTGCCGGTGGGGGATGTGGTGATGTCGTGA

Upstream 100 bases:

>100_bases
TAGTCCATCGTGGCTCCAATACATTCCATTTTGATGGGTCTACTCATGGTGCCACGGTTTTTCTATCGTCGGCACATCGA
TACAAGATTCGGAGCCTCGC

Downstream 100 bases:

>100_bases
TGTCGTGAGGGGGCGGGGTAGTCGTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTGGTCTTGGTGGTGCATCCCTTGTTT
CATCCCCTGCCGGGGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSTTESTSPTARTRVRRVAHRGHYDRTTLHAILDEAYVCHIAFADEHGVHCIPTACWREGGHLYIHGSNGSRMLKLAGSG
AQVCVTITHIDGLVLARSAFNHSMNYRSAVIYGAFEVVPDAQKAGVLDTFMEVLAPGRSRQARPGNAKELAATTVLRIPL
DEAACKVRTGGPKDDAEDLDLPVWAGVLPMALLPLPPVVEAAPAGTPDYVQEWRDSTRVPVGDVVMS

Sequences:

>Translated_227_residues
MSTTESTSPTARTRVRRVAHRGHYDRTTLHAILDEAYVCHIAFADEHGVHCIPTACWREGGHLYIHGSNGSRMLKLAGSG
AQVCVTITHIDGLVLARSAFNHSMNYRSAVIYGAFEVVPDAQKAGVLDTFMEVLAPGRSRQARPGNAKELAATTVLRIPL
DEAACKVRTGGPKDDAEDLDLPVWAGVLPMALLPLPPVVEAAPAGTPDYVQEWRDSTRVPVGDVVMS
>Mature_226_residues
STTESTSPTARTRVRRVAHRGHYDRTTLHAILDEAYVCHIAFADEHGVHCIPTACWREGGHLYIHGSNGSRMLKLAGSGA
QVCVTITHIDGLVLARSAFNHSMNYRSAVIYGAFEVVPDAQKAGVLDTFMEVLAPGRSRQARPGNAKELAATTVLRIPLD
EAACKVRTGGPKDDAEDLDLPVWAGVLPMALLPLPPVVEAAPAGTPDYVQEWRDSTRVPVGDVVMS

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24474; Mature: 24343

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTESTSPTARTRVRRVAHRGHYDRTTLHAILDEAYVCHIAFADEHGVHCIPTACWREG
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEECHHHHHCC
GHLYIHGSNGSRMLKLAGSGAQVCVTITHIDGLVLARSAFNHSMNYRSAVIYGAFEVVPD
CEEEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEHHEECCC
AQKAGVLDTFMEVLAPGRSRQARPGNAKELAATTVLRIPLDEAACKVRTGGPKDDAEDLD
HHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCHHHEEEECCCCCCCCCCCC
LPVWAGVLPMALLPLPPVVEAAPAGTPDYVQEWRDSTRVPVGDVVMS
CCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHCC
>Mature Secondary Structure 
STTESTSPTARTRVRRVAHRGHYDRTTLHAILDEAYVCHIAFADEHGVHCIPTACWREG
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEECHHHHHCC
GHLYIHGSNGSRMLKLAGSGAQVCVTITHIDGLVLARSAFNHSMNYRSAVIYGAFEVVPD
CEEEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEHHEECCC
AQKAGVLDTFMEVLAPGRSRQARPGNAKELAATTVLRIPLDEAACKVRTGGPKDDAEDLD
HHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCHHHEEEECCCCCCCCCCCC
LPVWAGVLPMALLPLPPVVEAAPAGTPDYVQEWRDSTRVPVGDVVMS
CCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA