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The map label for this gene is 187930407

Identifier: 187930407

GI number: 187930407

Start: 3497234

End: 3498418

Strand: Reverse

Name: 187930407

Synonym: Rpic_3340

Alternate gene names: NA

Gene position: 3498418-3497234 (Counterclockwise)

Preceding gene: 187930409

Following gene: 187930404

Centisome position: 88.73

GC content: 67.51

Gene sequence:

>1185_bases
ATGCAAACGGGAAATCACACGCGTAGCCGGGGGGCGCGCGGAGCGATGGGGTGCTTGCGGCCGTGGGCCGCGCTTGCCGC
GTGTGTGGCATGCATGGCCGCGTTGACAGCGCCAGCGGCCCACGCCGACATCAGCATCATCCAGTCTTTGCCGCTGTCCG
GCACGCAAGCCGCGACGGGGCGGGCGCTCAATGCGGGCGCGCGGCTGTATTTCGACTGGCTCAACCTGGACGGCGGTATC
AACGGCGAGACCATTCGCCTGGTCGCCCGTGACGACGAGCAGAAGGTCGAACAGACCGTCCGCAACGTGCGCGACATGGC
CAAGATCGACAACCCGGTGGCGGCGCTTACCGTGGTCGGCACCGCCAATGTGGAAGCGCTCATGCGCAGCGGCGTGCTGA
CCGAAGCCAACCTGCCGCTGGTTGGGCCGGCCACCGGGGCGTCCAGCATGACCGGCGATCCGCTGGTGTTTCCCATCAAG
GCCAGCTACCGGCAAGAGATCGACAAGATGGTGAGCGCGCTCGTTACCATTGGCGTCACGCGCATCGGCGTGCTGTATCA
GGACGATGCGCTCGGCAAGGAGGTGCTGGCAGGCGTGGAGCGCGCGCTCAAGCCGTACAAACTCACGATGGGCGGCACGG
CTTCGTACCCACGCAATACGGCTTCGGTGAGCGCCGCCGTCGACAAGCTGCTCGGCGCCGATGTGCAGGCCATCTTCCTG
GGCGCCACGGCCGAACCCGCCGCGCAGTTCATCAAGCAATACCGCGCGCGCGGTGGCGGCGCGCAACTGCTGGGCCTGTC
GTCGATTGATCCGGGCATCCTGCTCCGGGTGGCCGGCATCGACGCGGTGCGCGGCTATTCGCTGGCGCTCGTGATGCCGA
ACCCCGGCAAGGGCGTGAACCCCGTCATCCGCGAATTCAACCGCGCACGCGCGGCCGTGGGCGCCAAGGATGTCGAACTT
TCATTCCGGGCGGTGGAAGGCTTTGTGGCCGCGAAGGTGCTGGCCGAAGCCGTGCGCCGCGCCGGCCCCAAGCCCACGCG
CGACCAGGTGCGCCGCGAGCTGGCCCACCTGCGCAACTTCGATGTTGGCGGCGGGTTTATGGTGGACTTTTCCGACCGCA
CGCGTCCGGGCTCGCACTATGTGGAGTTGGGCGTGGTGGGGCCGAATGGGATGGTGATTCAGTAA

Upstream 100 bases:

>100_bases
GACGAGGGTGGGCGCCACACTAGAAAGCGGACCGCCGAAGCGGTCTCGACAAAAAAAAACGCCGTTGCCCAGGAGGCACG
CGGCGACATGGGTGCGAACA

Downstream 100 bases:

>100_bases
CGCTGGGCGCGTGAAGCTTGTTGTGCTGAATGGCGGGGTTGGGAGTGAGGAGGAACGGGGGGTTCTTTGCTGGTGGTGCA
TCCCTTGTTTCATCCCCTGC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MQTGNHTRSRGARGAMGCLRPWAALAACVACMAALTAPAAHADISIIQSLPLSGTQAATGRALNAGARLYFDWLNLDGGI
NGETIRLVARDDEQKVEQTVRNVRDMAKIDNPVAALTVVGTANVEALMRSGVLTEANLPLVGPATGASSMTGDPLVFPIK
ASYRQEIDKMVSALVTIGVTRIGVLYQDDALGKEVLAGVERALKPYKLTMGGTASYPRNTASVSAAVDKLLGADVQAIFL
GATAEPAAQFIKQYRARGGGAQLLGLSSIDPGILLRVAGIDAVRGYSLALVMPNPGKGVNPVIREFNRARAAVGAKDVEL
SFRAVEGFVAAKVLAEAVRRAGPKPTRDQVRRELAHLRNFDVGGGFMVDFSDRTRPGSHYVELGVVGPNGMVIQ

Sequences:

>Translated_394_residues
MQTGNHTRSRGARGAMGCLRPWAALAACVACMAALTAPAAHADISIIQSLPLSGTQAATGRALNAGARLYFDWLNLDGGI
NGETIRLVARDDEQKVEQTVRNVRDMAKIDNPVAALTVVGTANVEALMRSGVLTEANLPLVGPATGASSMTGDPLVFPIK
ASYRQEIDKMVSALVTIGVTRIGVLYQDDALGKEVLAGVERALKPYKLTMGGTASYPRNTASVSAAVDKLLGADVQAIFL
GATAEPAAQFIKQYRARGGGAQLLGLSSIDPGILLRVAGIDAVRGYSLALVMPNPGKGVNPVIREFNRARAAVGAKDVEL
SFRAVEGFVAAKVLAEAVRRAGPKPTRDQVRRELAHLRNFDVGGGFMVDFSDRTRPGSHYVELGVVGPNGMVIQ
>Mature_394_residues
MQTGNHTRSRGARGAMGCLRPWAALAACVACMAALTAPAAHADISIIQSLPLSGTQAATGRALNAGARLYFDWLNLDGGI
NGETIRLVARDDEQKVEQTVRNVRDMAKIDNPVAALTVVGTANVEALMRSGVLTEANLPLVGPATGASSMTGDPLVFPIK
ASYRQEIDKMVSALVTIGVTRIGVLYQDDALGKEVLAGVERALKPYKLTMGGTASYPRNTASVSAAVDKLLGADVQAIFL
GATAEPAAQFIKQYRARGGGAQLLGLSSIDPGILLRVAGIDAVRGYSLALVMPNPGKGVNPVIREFNRARAAVGAKDVEL
SFRAVEGFVAAKVLAEAVRRAGPKPTRDQVRRELAHLRNFDVGGGFMVDFSDRTRPGSHYVELGVVGPNGMVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41409; Mature: 41409

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGNHTRSRGARGAMGCLRPWAALAACVACMAALTAPAAHADISIIQSLPLSGTQAATG
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
RALNAGARLYFDWLNLDGGINGETIRLVARDDEQKVEQTVRNVRDMAKIDNPVAALTVVG
CEECCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
TANVEALMRSGVLTEANLPLVGPATGASSMTGDPLVFPIKASYRQEIDKMVSALVTIGVT
CCCHHHHHHCCCCEECCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
RIGVLYQDDALGKEVLAGVERALKPYKLTMGGTASYPRNTASVSAAVDKLLGADVQAIFL
HHEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
GATAEPAAQFIKQYRARGGGAQLLGLSSIDPGILLRVAGIDAVRGYSLALVMPNPGKGVN
ECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCC
PVIREFNRARAAVGAKDVELSFRAVEGFVAAKVLAEAVRRAGPKPTRDQVRRELAHLRNF
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
DVGGGFMVDFSDRTRPGSHYVELGVVGPNGMVIQ
CCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEC
>Mature Secondary Structure
MQTGNHTRSRGARGAMGCLRPWAALAACVACMAALTAPAAHADISIIQSLPLSGTQAATG
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
RALNAGARLYFDWLNLDGGINGETIRLVARDDEQKVEQTVRNVRDMAKIDNPVAALTVVG
CEECCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
TANVEALMRSGVLTEANLPLVGPATGASSMTGDPLVFPIKASYRQEIDKMVSALVTIGVT
CCCHHHHHHCCCCEECCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
RIGVLYQDDALGKEVLAGVERALKPYKLTMGGTASYPRNTASVSAAVDKLLGADVQAIFL
HHEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
GATAEPAAQFIKQYRARGGGAQLLGLSSIDPGILLRVAGIDAVRGYSLALVMPNPGKGVN
ECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCC
PVIREFNRARAAVGAKDVELSFRAVEGFVAAKVLAEAVRRAGPKPTRDQVRRELAHLRNF
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
DVGGGFMVDFSDRTRPGSHYVELGVVGPNGMVIQ
CCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA