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The map label for this gene is yedZ [H]

Identifier: 187930325

GI number: 187930325

Start: 3408244

End: 3408900

Strand: Reverse

Name: yedZ [H]

Synonym: Rpic_3258

Alternate gene names: 187930325

Gene position: 3408900-3408244 (Counterclockwise)

Preceding gene: 187930326

Following gene: 187930322

Centisome position: 86.46

GC content: 64.69

Gene sequence:

>657_bases
ATGACACTGCTGCCGCCGATGTTGCCGCCCAAGCCATTGCGTGTGGTGAAGGCGATCGTATGGATCGTGGCGCTGCTGCC
CTTCCTGCGCATCGTCTTCCTGGGCGCGACAGACCAGTTCGGGGCCAATCCTCTGGAGTTCGTCACGCGCTCGACCGGTA
CGTGGACGCTGGTGCTGCTCTGCTGCACGCTAGCCATCACGCCGCTGCGCCGCATCACGGGCATGAACTGGTTGATCCGG
CTTCGCCGCATGCTCGGGCTGTACACGTTCTTCTACGGCGCGATCCACTTCCTGATCTGGTTACTGGTGGACCGCGGGCT
CGATCCGGCGTCGATGCTCAAGGACATCGTCAAGCGGCCCTTCATCACCGTTGGCTTTGCGGCGTTCGTGCTGATGATTC
CGCTGGCCGCCACGTCGACCAACGCGATGGTGCGCCGCCTGGGTGGCAAGCGCTGGCAGTGGCTGCACCGGCTTGTCTAC
GTGACGGGCGTGCTGGGCATCCTGCATTACTGGTGGCACAAGGCCGGCAAGCATGACTTTGCCGAGGTGTCGATCTACGC
CGCAGTGATGGCGGTGCTGCTGGGCCTGCGGGTGTGGTGGGCATGGCGCTCGCAGCGCAGTGCGATGACCGGGGCCGTGA
TGCCAGCCCGCGATTGA

Upstream 100 bases:

>100_bases
CTGTTCGCGCCCAAGCGCAAGACGCTGATGTTCAACGGTTACGACCAGGTGGCCCCGCTGTATGCCGGCATGGACCTGCG
CAAAAATTTCTGAGGCCGAC

Downstream 100 bases:

>100_bases
TGCCGATCGCGCCCAAAAAAAGCCGACGTTGGCGCGTCGGCTTTTTCTTTGCGATGCGGGCTTACGCCGGGAACAGATGC
TCGCCGCGGATCAGGTCTTC

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTLLPPMLPPKPLRVVKAIVWIVALLPFLRIVFLGATDQFGANPLEFVTRSTGTWTLVLLCCTLAITPLRRITGMNWLIR
LRRMLGLYTFFYGAIHFLIWLLVDRGLDPASMLKDIVKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGKRWQWLHRLVY
VTGVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWAWRSQRSAMTGAVMPARD

Sequences:

>Translated_218_residues
MTLLPPMLPPKPLRVVKAIVWIVALLPFLRIVFLGATDQFGANPLEFVTRSTGTWTLVLLCCTLAITPLRRITGMNWLIR
LRRMLGLYTFFYGAIHFLIWLLVDRGLDPASMLKDIVKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGKRWQWLHRLVY
VTGVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWAWRSQRSAMTGAVMPARD
>Mature_217_residues
TLLPPMLPPKPLRVVKAIVWIVALLPFLRIVFLGATDQFGANPLEFVTRSTGTWTLVLLCCTLAITPLRRITGMNWLIRL
RRMLGLYTFFYGAIHFLIWLLVDRGLDPASMLKDIVKRPFITVGFAAFVLMIPLAATSTNAMVRRLGGKRWQWLHRLVYV
TGVLGILHYWWHKAGKHDFAEVSIYAAVMAVLLGLRVWWAWRSQRSAMTGAVMPARD

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=166, Percent_Identity=37.9518072289157, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 24830; Mature: 24699

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLPPMLPPKPLRVVKAIVWIVALLPFLRIVFLGATDQFGANPLEFVTRSTGTWTLVLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHH
CCTLAITPLRRITGMNWLIRLRRMLGLYTFFYGAIHFLIWLLVDRGLDPASMLKDIVKRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
FITVGFAAFVLMIPLAATSTNAMVRRLGGKRWQWLHRLVYVTGVLGILHYWWHKAGKHDF
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEVSIYAAVMAVLLGLRVWWAWRSQRSAMTGAVMPARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLLPPMLPPKPLRVVKAIVWIVALLPFLRIVFLGATDQFGANPLEFVTRSTGTWTLVLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHH
CCTLAITPLRRITGMNWLIRLRRMLGLYTFFYGAIHFLIWLLVDRGLDPASMLKDIVKRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
FITVGFAAFVLMIPLAATSTNAMVRRLGGKRWQWLHRLVYVTGVLGILHYWWHKAGKHDF
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEVSIYAAVMAVLLGLRVWWAWRSQRSAMTGAVMPARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]