| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is tatA
Identifier: 187930286
GI number: 187930286
Start: 3369119
End: 3369376
Strand: Reverse
Name: tatA
Synonym: Rpic_3219
Alternate gene names: 187930286
Gene position: 3369376-3369119 (Counterclockwise)
Preceding gene: 187930287
Following gene: 187930285
Centisome position: 85.46
GC content: 60.85
Gene sequence:
>258_bases ATGGGTTCCTTTAGCATTTGGCACTGGCTGATCGTGCTGGTCATCATCATGATGGTCTTCGGCACGAAGAAGCTGCGCAA CATCGGTTCGGATCTGGGCAGCGCCGTGAAGGGCTTCAAGGACGGCATGCGCGAAGGGCAGGAAGACAAGCCCGCCGGTT CGCAACAGCCTCAACAGACCGCCGGTCAGCCGCCGCGCGAGTTGCACGATGCGACGACGATCGACGTCGAAGCGCGCGAC AAGTCCAAGCAAGGCTGA
Upstream 100 bases:
>100_bases ATCTGAATGACAGCAAGCCGATGTACGCAAATCCGTAAAATCAACCAATGGCGTCGCCACCGTTGCGACGCCACCAGCCG TATTTACGTGGGAGTAGGAC
Downstream 100 bases:
>100_bases ACACAGACGCCCCGCTGACCGATGATCGATCTCGGCATTTCCAAGCTGGCGCTGATTGGCATGGTGGCGCTCGTCGTCAT CGGGCCCGAGCGTCTGCCCA
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MGSFSIWHWLIVLVIIMMVFGTKKLRNIGSDLGSAVKGFKDGMREGQEDKPAGSQQPQQTAGQPPRELHDATTIDVEARD KSKQG
Sequences:
>Translated_85_residues MGSFSIWHWLIVLVIIMMVFGTKKLRNIGSDLGSAVKGFKDGMREGQEDKPAGSQQPQQTAGQPPRELHDATTIDVEARD KSKQG >Mature_84_residues GSFSIWHWLIVLVIIMMVFGTKKLRNIGSDLGSAVKGFKDGMREGQEDKPAGSQQPQQTAGQPPRELHDATTIDVEARDK SKQG
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=86, Percent_Identity=41.8604651162791, Blast_Score=64, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_RALPJ (B2UEE1)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001900773.1 - GeneID: 6286913 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_3219 - HOGENOM: HBG751935 - OMA: VWHWVIV - ProtClustDB: PRK02958 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 9353; Mature: 9222
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16f1a140)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFSIWHWLIVLVIIMMVFGTKKLRNIGSDLGSAVKGFKDGMREGQEDKPAGSQQPQQT CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AGQPPRELHDATTIDVEARDKSKQG CCCCCHHHHCCCCCCCCCCCCCCCH >Mature Secondary Structure GSFSIWHWLIVLVIIMMVFGTKKLRNIGSDLGSAVKGFKDGMREGQEDKPAGSQQPQQT CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AGQPPRELHDATTIDVEARDKSKQG CCCCCHHHHCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA