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The map label for this gene is 187930277

Identifier: 187930277

GI number: 187930277

Start: 3358489

End: 3359595

Strand: Reverse

Name: 187930277

Synonym: Rpic_3210

Alternate gene names: NA

Gene position: 3359595-3358489 (Counterclockwise)

Preceding gene: 187930278

Following gene: 187930275

Centisome position: 85.21

GC content: 61.25

Gene sequence:

>1107_bases
ATGAAGATGAAACTGTTTGCAGCTGCTGTTGCAGCTTTGGCCGCCGGTGGCGCCTATGCACAATCCTCCGTGACCCTGTA
CGGCGTGGTCGACGCTGGTCTGACCTACGCAAACAAGGTGCCGGGCGCAACCGCTGGTTCGAGCGGCTCGCGTTTTGGCC
TGGATTCGGGCGGCCTGTCGGGCTCGCGTTGGGGCCTGCGTGGCGTTGAAGACCTGGGCGGTGGCCTGAAGGGTATCTTC
AACCTGGAAAGCGGCTTTAACCTGGACACCGGCACGTCGGCTCAAGGTGGCCGTCTGTTCGGTCGTAACGCCTACGTTGG
TCTGCAAGGCCAGTGGGGTCAACTGACCCTGGGTCGTCAGCAAAACCTGCTGTATGACTTCTCGCTGGTCTATGACCCGA
TGGCAATCGCCACGCGTTACTCGCTGGCTGCGCAAGACGCCTTCTTCTCTGGTCGTGCTGACAACGCCGTCAAGTACGTC
GGCACGTTCGGTGGCCTGAGCGTCTCCGGTCTGTACTCGTTCAACTACAACGGCAACGAAGTGGCTGGCAGCAGCAAGAC
CGGCCGCGAGTGGAGCCTGGGTGCTAACTACGCTGGCGGCCCGCTGGGTATCGGCGCAGTGTATGACCAGACCAACTCGA
CGACCGTTGGTAGCGACAACCGCGAACAACGCGCCACGATCGCTGGCACGTACGCTTTCGGCCCGGCCAAGCTGTACGCT
GGCTACCGTTGGTACAAGGCTAACTACGCAACTGTTGCTGGCAACGGCAACCTGCGTTCGAACCTGTACTGGGCTGGCCT
GGGTTACCAAGCTACTCCGGCTCTGTCGCTGACGGGCACGGCCTACTACCAACAGTTCAAGAACAGCGGTACGGGCAACC
CGTGGCTGTTCGTGGTCGGCACCGACTACGCTCTGTCGAAGCGCACCGACGCGTACTTCAACCTGGCCTATGCTAAGAAC
AGCGGCGGCTCGGGTCTGGGCGTGCTGGGCCTGAACGATGCTAGCTACGCTGGCACGACGCTGACGAGCGGCAGCCAAGT
GTTCTCGGGTCCGAACAACAACAACAACCAGTTCGGTGCTACGGTTGGCCTGCGTCACAAGTTCTAA

Upstream 100 bases:

>100_bases
TCAGTCAGCGCTGGCACATAATGCGGTCAGACGTGAGGTATCTGCGTCGTCCATAAGGACAGTCAAGATTTCCCAATCAG
TTGACAAGGAAAGTGTCGAT

Downstream 100 bases:

>100_bases
TTTGACGCGCTCGTAAGGGTGCATCGAATTAAACGGTTAAACGCCGATCCCGAAAGGGGTCGGCGTTTTTCTTTGTGCGA
ACGATTCGCGTGCTTCTCCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLSGSRWGLRGVEDLGGGLKGIF
NLESGFNLDTGTSAQGGRLFGRNAYVGLQGQWGQLTLGRQQNLLYDFSLVYDPMAIATRYSLAAQDAFFSGRADNAVKYV
GTFGGLSVSGLYSFNYNGNEVAGSSKTGREWSLGANYAGGPLGIGAVYDQTNSTTVGSDNREQRATIAGTYAFGPAKLYA
GYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYYQQFKNSGTGNPWLFVVGTDYALSKRTDAYFNLAYAKN
SGGSGLGVLGLNDASYAGTTLTSGSQVFSGPNNNNNQFGATVGLRHKF

Sequences:

>Translated_368_residues
MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLSGSRWGLRGVEDLGGGLKGIF
NLESGFNLDTGTSAQGGRLFGRNAYVGLQGQWGQLTLGRQQNLLYDFSLVYDPMAIATRYSLAAQDAFFSGRADNAVKYV
GTFGGLSVSGLYSFNYNGNEVAGSSKTGREWSLGANYAGGPLGIGAVYDQTNSTTVGSDNREQRATIAGTYAFGPAKLYA
GYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYYQQFKNSGTGNPWLFVVGTDYALSKRTDAYFNLAYAKN
SGGSGLGVLGLNDASYAGTTLTSGSQVFSGPNNNNNQFGATVGLRHKF
>Mature_368_residues
MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLSGSRWGLRGVEDLGGGLKGIF
NLESGFNLDTGTSAQGGRLFGRNAYVGLQGQWGQLTLGRQQNLLYDFSLVYDPMAIATRYSLAAQDAFFSGRADNAVKYV
GTFGGLSVSGLYSFNYNGNEVAGSSKTGREWSLGANYAGGPLGIGAVYDQTNSTTVGSDNREQRATIAGTYAFGPAKLYA
GYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYYQQFKNSGTGNPWLFVVGTDYALSKRTDAYFNLAYAKN
SGGSGLGVLGLNDASYAGTTLTSGSQVFSGPNNNNNQFGATVGLRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38367; Mature: 38367

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLS
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCC
GSRWGLRGVEDLGGGLKGIFNLESGFNLDTGTSAQGGRLFGRNAYVGLQGQWGQLTLGRQ
CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCC
QNLLYDFSLVYDPMAIATRYSLAAQDAFFSGRADNAVKYVGTFGGLSVSGLYSFNYNGNE
CCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCE
VAGSSKTGREWSLGANYAGGPLGIGAVYDQTNSTTVGSDNREQRATIAGTYAFGPAKLYA
ECCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEEECCCHHHHC
GYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYYQQFKNSGTGNPWLFVVG
CEEEEECCEEEEECCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHCCCCCCCEEEEEE
TDYALSKRTDAYFNLAYAKNSGGSGLGVLGLNDASYAGTTLTSGSQVFSGPNNNNNQFGA
CCCEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCEEECCCCCCCCEEEE
TVGLRHKF
EEEEEECC
>Mature Secondary Structure
MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLS
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCC
GSRWGLRGVEDLGGGLKGIFNLESGFNLDTGTSAQGGRLFGRNAYVGLQGQWGQLTLGRQ
CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCC
QNLLYDFSLVYDPMAIATRYSLAAQDAFFSGRADNAVKYVGTFGGLSVSGLYSFNYNGNE
CCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCE
VAGSSKTGREWSLGANYAGGPLGIGAVYDQTNSTTVGSDNREQRATIAGTYAFGPAKLYA
ECCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEEECCCHHHHC
GYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYYQQFKNSGTGNPWLFVVG
CEEEEECCEEEEECCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHCCCCCCCEEEEEE
TDYALSKRTDAYFNLAYAKNSGGSGLGVLGLNDASYAGTTLTSGSQVFSGPNNNNNQFGA
CCCEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCEEECCCCCCCCEEEE
TVGLRHKF
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]