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The map label for this gene is petB [H]

Identifier: 187930272

GI number: 187930272

Start: 3353365

End: 3354765

Strand: Reverse

Name: petB [H]

Synonym: Rpic_3205

Alternate gene names: 187930272

Gene position: 3354765-3353365 (Counterclockwise)

Preceding gene: 187930273

Following gene: 187930271

Centisome position: 85.09

GC content: 60.89

Gene sequence:

>1401_bases
ATGGCCGAGAAGAAGGTGGAGACAACCGGGCTGCTGGGCTGGATCGATGCGCGCTTCCCGGCATCGGAGCTGTGGAAGGC
GCATCTGTCGGAGTACTACGCGCCGAAGAATTTCAACTTCTGGTATTTCTTCGGATCGCTGGCGCTGCTGGTGCTGGTGA
TCCAGATCGTCACGGGCATCTTCCTGGTGATGAACTACAAGCCGGACGGCACGCTCAACGCCGCCGGCATTCCCGTCGCC
TATGCGAGCGTGGAGTTCATCATGCGCGAGGTGCCGTGGGGCTGGTTGGTGCGCTATATGCACTCAACCGGCGCTTCGGC
GTTCTTTATCGTCGTGTATCTGCACATGTTCCGCGGCATGCTGTACGGCTCGTACCGTAAGCCGCGCGAGCTGGTCTGGA
TCTTCGGCTGCCTGATCTTCCTGTGCCTGATGGCAGAAGCCTTCATGGGCTATCTGCTGCCGTGGGGTCAGATGTCGTAC
TGGGGCGCGCAGGTCATCGTGAACCTGTTCTCCGCCATCCCGCTGATCGGTCCGGACTTGTCGCTGTGGATCCGCGGTGA
CTACGTGGTGTCGGACGCGACGCTGAACCGCTTCTTCTCGTTCCACGTCATCGCCGTGCCGCTGGTGCTGCTGGGCCTGG
TGGTGGCGCACATCATCGCGCTGCACGAAGTGGGTTCGAACAATCCGGACGGCGTCGAGATCAAGGCCAAGAAGGACGAG
CGCGGCATTCCGCTCGACGGCATTCCGTTCCACCCGTATTACTCGGTGCACGACATCGTCGGCGTGGCGGTGTTCCTGTT
CATCTTCAGCGCGATCGTGTTCTTCGCGCCGGAAATGGGCGGCTACTTCCTGGAAGCCAACAACTTCATCCCGGCAGACT
CGCTGAAGACGCCGCCACACATTGCGCCGGTCTGGTACTTCACGCCGTTCTACTCGATGCTGCGCGCGACCACGTCGGAC
TTCCTGCCGTGGTTGTGGGGCTTCATCGCGATCATGCTGGGTCTGCTGTTCGCTCGCACGAAGAGTATGAATGTCAAAGT
GGTGGCCGTGGCTGTGGCCGTGATCCTGGCACTGGGCTTCAAGTTCATCGACGCGAAGTTCTGGGGCGTGGTTGTGATGG
GCGGTTCGGTGGTGATCTTCTTCTTCCTGCCGTGGCTGGACCACTCGCCGGTCAAGTCGATTCGCTATCGCCCTGGCTTC
CACAAGACGCTACTGATCCTCTTCGTGATCGCCTTTGCGGTCCTGGGTTACCTGGGCATTCAGCCGCCGAGCCCGGTCGG
TTCGATCATCTCGCAGATCGGCACCATTCTGTACTTCGCGTTCTTCCTCGCGATGCCGATCTGGAGCCAGATCGGGACGT
TCAAGCCAGTGCCCGAGCGCGTCACGTTCACGCCGCACTGA

Upstream 100 bases:

>100_bases
AGAACAAGCCCGCGCCGCAGAACCTCGACGTTCCGCCGTACATGTTCCTGTCCGACACGAAGCTGGTGATCGGTAAAGAC
GAGAAAGGAGAGGCTTGATC

Downstream 100 bases:

>100_bases
TAGAGCCCGCGCACAAGGACCCATGAAGGACACAAGAATGAAAAAGCTGCTTGCGATTTTCGCCTTGGCCGGTCTCGTGT
TTGCCGCGCCCGTGATGGCC

Product: Cytochrome b/b6 domain

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MAEKKVETTGLLGWIDARFPASELWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPVA
YASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSY
WGAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKDE
RGIPLDGIPFHPYYSVHDIVGVAVFLFIFSAIVFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTSD
FLPWLWGFIAIMLGLLFARTKSMNVKVVAVAVAVILALGFKFIDAKFWGVVVMGGSVVIFFFLPWLDHSPVKSIRYRPGF
HKTLLILFVIAFAVLGYLGIQPPSPVGSIISQIGTILYFAFFLAMPIWSQIGTFKPVPERVTFTPH

Sequences:

>Translated_466_residues
MAEKKVETTGLLGWIDARFPASELWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPVA
YASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSY
WGAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKDE
RGIPLDGIPFHPYYSVHDIVGVAVFLFIFSAIVFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTSD
FLPWLWGFIAIMLGLLFARTKSMNVKVVAVAVAVILALGFKFIDAKFWGVVVMGGSVVIFFFLPWLDHSPVKSIRYRPGF
HKTLLILFVIAFAVLGYLGIQPPSPVGSIISQIGTILYFAFFLAMPIWSQIGTFKPVPERVTFTPH
>Mature_465_residues
AEKKVETTGLLGWIDARFPASELWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPVAY
ASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSYW
GAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKDER
GIPLDGIPFHPYYSVHDIVGVAVFLFIFSAIVFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTSDF
LPWLWGFIAIMLGLLFARTKSMNVKVVAVAVAVILALGFKFIDAKFWGVVVMGGSVVIFFFLPWLDHSPVKSIRYRPGFH
KTLLILFVIAFAVLGYLGIQPPSPVGSIISQIGTILYFAFFLAMPIWSQIGTFKPVPERVTFTPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=412, Percent_Identity=36.8932038834951, Blast_Score=241, Evalue=7e-64,
Organism=Saccharomyces cerevisiae, GI6226529, Length=324, Percent_Identity=41.358024691358, Blast_Score=233, Evalue=6e-62,
Organism=Saccharomyces cerevisiae, GI6226532, Length=248, Percent_Identity=44.758064516129, Blast_Score=203, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=49.0566037735849, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6226530, Length=144, Percent_Identity=46.5277777777778, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52414; Mature: 52283

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEKKVETTGLLGWIDARFPASELWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGI
CCCCCCHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA