Click here to switch to the map view.

The map label for this gene is 187930220

Identifier: 187930220

GI number: 187930220

Start: 3302547

End: 3303287

Strand: Reverse

Name: 187930220

Synonym: Rpic_3153

Alternate gene names: NA

Gene position: 3303287-3302547 (Counterclockwise)

Preceding gene: 187930226

Following gene: 187930219

Centisome position: 83.79

GC content: 66.8

Gene sequence:

>741_bases
ATGACCTGCTGGACGCGACGCGCCACTGCAACTGCTGCGCTTGCCATCTCGACCTCGTTGCTCGCGCCCGTGGCGTTTGC
CGCACCCGCAGCCAAGGCTGCTCCCAAGGCCGCAGCACCCGCCAAGGCGGCGCGCGACCCTGGCGATGTGGCGGTGCTGC
TCGATGCCTTTCCGCTCGGCAAGCCGCTGCGCAAGCTGCCTTCGTGCGAAGACGTCCGCGCGAATGGCGGCAACGACGTC
GCCGAATATTGCTCCGACGCGCTGGAATCGCACGGCCGCACGCGTTCGCTGGGCGTGCCGCAGGCATCGCGCCCCGAGTT
GATGGATGGACCGCAGGCCGTGCTGCTGATTGACCAGGATGGCAACATCGCCGGCATGTTCGTGCCGACGCGCGGCGTGG
ATACCGAACAGCGCGTCTTCCAGGCCTTGTCCGATCGCTACGGCAAGCCAGCGCAGGAAGGCAAGGCGCCCCTCAAGCTC
AAGTCTGGCAAGACAGTCGATTCGCTTCGCGCACGTTGGGCGGGTCAGCAGACGATCATCACGATGTATGCGATTCCTGA
AGAGCCACAGAACGGCACGGTGGAATTCCTTTGGGCGCCGCGCGCCGGGGCGGTCATGGACCAGATGCGTGCGGAAGTCG
ACCCGAATGCACCCAAACCGCCTGCGGCGTCCGGTGTGGCCGCGTCCGCGCCCGCCGCGACGGCCAAGCCTTCTGCAGGT
AAGCCGATGCCTAAGCAGTGA

Upstream 100 bases:

>100_bases
TGACGGGAACGCAGGCCGTCTGCCGGCAGTCAGAATCGCTTTTCCGTGCGCCCGGATTCCCGCGTGGCACACTTTCGGCT
CTTTTCTCAATGGAGTTCGC

Downstream 100 bases:

>100_bases
ACTTACGAACACCCGTTCGTAGTTTTCGGTTACACCGCTTACACCCGCATGACGCCGGCGTCGCTCGCGCCGGCTTATAA
CGTCGACATGGCTCCACTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTCWTRRATATAALAISTSLLAPVAFAAPAAKAAPKAAAPAKAARDPGDVAVLLDAFPLGKPLRKLPSCEDVRANGGNDV
AEYCSDALESHGRTRSLGVPQASRPELMDGPQAVLLIDQDGNIAGMFVPTRGVDTEQRVFQALSDRYGKPAQEGKAPLKL
KSGKTVDSLRARWAGQQTIITMYAIPEEPQNGTVEFLWAPRAGAVMDQMRAEVDPNAPKPPAASGVAASAPAATAKPSAG
KPMPKQ

Sequences:

>Translated_246_residues
MTCWTRRATATAALAISTSLLAPVAFAAPAAKAAPKAAAPAKAARDPGDVAVLLDAFPLGKPLRKLPSCEDVRANGGNDV
AEYCSDALESHGRTRSLGVPQASRPELMDGPQAVLLIDQDGNIAGMFVPTRGVDTEQRVFQALSDRYGKPAQEGKAPLKL
KSGKTVDSLRARWAGQQTIITMYAIPEEPQNGTVEFLWAPRAGAVMDQMRAEVDPNAPKPPAASGVAASAPAATAKPSAG
KPMPKQ
>Mature_245_residues
TCWTRRATATAALAISTSLLAPVAFAAPAAKAAPKAAAPAKAARDPGDVAVLLDAFPLGKPLRKLPSCEDVRANGGNDVA
EYCSDALESHGRTRSLGVPQASRPELMDGPQAVLLIDQDGNIAGMFVPTRGVDTEQRVFQALSDRYGKPAQEGKAPLKLK
SGKTVDSLRARWAGQQTIITMYAIPEEPQNGTVEFLWAPRAGAVMDQMRAEVDPNAPKPPAASGVAASAPAATAKPSAGK
PMPKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25631; Mature: 25500

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCWTRRATATAALAISTSLLAPVAFAAPAAKAAPKAAAPAKAARDPGDVAVLLDAFPLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHCCCCCCEEEEEECCCCC
KPLRKLPSCEDVRANGGNDVAEYCSDALESHGRTRSLGVPQASRPELMDGPQAVLLIDQD
HHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECC
GNIAGMFVPTRGVDTEQRVFQALSDRYGKPAQEGKAPLKLKSGKTVDSLRARWAGQQTII
CCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCHHHHHHHHCCCEEEE
TMYAIPEEPQNGTVEFLWAPRAGAVMDQMRAEVDPNAPKPPAASGVAASAPAATAKPSAG
EEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPMPKQ
CCCCCC
>Mature Secondary Structure 
TCWTRRATATAALAISTSLLAPVAFAAPAAKAAPKAAAPAKAARDPGDVAVLLDAFPLG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHCCCCCCEEEEEECCCCC
KPLRKLPSCEDVRANGGNDVAEYCSDALESHGRTRSLGVPQASRPELMDGPQAVLLIDQD
HHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECC
GNIAGMFVPTRGVDTEQRVFQALSDRYGKPAQEGKAPLKLKSGKTVDSLRARWAGQQTII
CCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCHHHHHHHHCCCEEEE
TMYAIPEEPQNGTVEFLWAPRAGAVMDQMRAEVDPNAPKPPAASGVAASAPAATAKPSAG
EEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPMPKQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA