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The map label for this gene is yaeJ [C]

Identifier: 187930170

GI number: 187930170

Start: 3241381

End: 3241815

Strand: Reverse

Name: yaeJ [C]

Synonym: Rpic_3102

Alternate gene names: 187930170

Gene position: 3241815-3241381 (Counterclockwise)

Preceding gene: 187930172

Following gene: 187930167

Centisome position: 82.23

GC content: 64.83

Gene sequence:

>435_bases
ATGCCCGGCACCGACCTCAAAATCACCCCCCAATTGTCCATTCCGGAGTCGGAACTGGTCGAGCGCTTTGTGCGCGCAAG
CGGCGCGGGTGGGCAGAACATCAACAAGGTATCGACGGCGGTGGAGTTGCGCTTTGACATCGCCCAATCGCCCTCGTTGC
CGGACGCATTGCGAGCGCGTCTGTTGGAAAAACGCGACCGCCGCTTGACCGATGAGGGCGTGTTTGTGATTGATGCTCAA
CGGTTTCGCACGCAGGACCGCAACCGCCAGGATGCCCGCGAACGTCTGGCGGCGTTCATCGCGACGGGGCTTGCGGTGCC
CAGGTCGCGCATCGCCACCAAGCCCACGCGCGCTTCCAAGACGCGCCGCCTGGAAGGCAAGCGCGCGCGTGGCGACGTCA
AGCGTGGTCGCTCGGGCCGCCACTCTTGGGACTAA

Upstream 100 bases:

>100_bases
GGCAAGGATGGCCCCGGCCAAGTGGCTGAAGCCGTTGAAACGTTCTCCGCGATACATACGCTGATCTCCAGAAAGACCCT
GTTCTCCCTACAATGCCTCA

Downstream 100 bases:

>100_bases
GCGTGCTGATATGCGTGGCCCTTACATCAGCCGGGTATGGCGTGTCTCGCGCATGCAAAGCACGCCGATCAGGCTGACCA
CCGCGGCCGCCGATACATAC

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPGTDLKITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRARLLEKRDRRLTDEGVFVIDAQ
RFRTQDRNRQDARERLAAFIATGLAVPRSRIATKPTRASKTRRLEGKRARGDVKRGRSGRHSWD

Sequences:

>Translated_144_residues
MPGTDLKITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRARLLEKRDRRLTDEGVFVIDAQ
RFRTQDRNRQDARERLAAFIATGLAVPRSRIATKPTRASKTRRLEGKRARGDVKRGRSGRHSWD
>Mature_143_residues
PGTDLKITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRARLLEKRDRRLTDEGVFVIDAQR
FRTQDRNRQDARERLAAFIATGLAVPRSRIATKPTRASKTRRLEGKRARGDVKRGRSGRHSWD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=137, Percent_Identity=45.985401459854, Blast_Score=105, Evalue=9e-25,
Organism=Drosophila melanogaster, GI19921098, Length=138, Percent_Identity=36.231884057971, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16190; Mature: 16058

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTDLKITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRAR
CCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LLEKRDRRLTDEGVFVIDAQRFRTQDRNRQDARERLAAFIATGLAVPRSRIATKPTRASK
HHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
TRRLEGKRARGDVKRGRSGRHSWD
HHHHCCCHHHCHHHCCCCCCCCCC
>Mature Secondary Structure 
PGTDLKITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRAR
CCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LLEKRDRRLTDEGVFVIDAQRFRTQDRNRQDARERLAAFIATGLAVPRSRIATKPTRASK
HHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
TRRLEGKRARGDVKRGRSGRHSWD
HHHHCCCHHHCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]