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The map label for this gene is coq7

Identifier: 187930167

GI number: 187930167

Start: 3237643

End: 3238296

Strand: Reverse

Name: coq7

Synonym: Rpic_3099

Alternate gene names: 187930167

Gene position: 3238296-3237643 (Counterclockwise)

Preceding gene: 187930170

Following gene: 187930166

Centisome position: 82.14

GC content: 68.04

Gene sequence:

>654_bases
ATGCTCGACCGCTTCATCCCCGAATTCGACCGCGCCTTGCGCGCTGTGGCAGGCGTCACCCGCGCCAGCCGACCGAACCC
CGCTGATGCCGTTATCGCGTCCGCCGCCTCCACAAATACGGCCGACAACGCGACCAAGCTTTCTGAGGCCGACCGCCGCC
ATGCCGCCGGCCTGATGCGCGTGAACCATGTCGGCGAGGTCTGCGCCCAGGCCTTGTACCAGGGGCAAGCGCTGTTTGCC
CGGGACCCGGCCATCCGGACCCAGCTCGACGAAGCCGCGCGCGAAGAAGAGGACCACCTCGCTTGGTGCGCCCAGCGCCT
GCAGGAATTGAACGATCGCCCGAGCCTGCTGAACCCGCTGTGGTATGCCGGCGCTTTCGCGATCGGCGCGGTGGCCGGAC
GCCTCGGCGACAAGATCAGTCTCGGCTTCGTCGCTGAGACCGAGCGCCAGGTCGAGCATCACCTCGATGGCCATCTCGAT
ACCTTGCCCGAACAGGACACCCGCTCGCGCGCCATCGTCGCCCAGATGCGCGACGACGAGATCCGTCACGGCGACAACGC
GCGCCAGGCCGGCGGCATTGATCTGCCAGCGCCGATCCGCCAAGCCATGCGTGCCGCGTCACGCGTCATGACGACTGCCG
CGTACCGCATCTGA

Upstream 100 bases:

>100_bases
TGTTTGGACGGCCGGGTTCTGATCGGACGCAAGATCCCGCCCGGTGTCGGCCTTACAATGGCAATTGCGCCGCACGCCAT
TGCCGGCGGCGCCCGTACTC

Downstream 100 bases:

>100_bases
CGCGTGCAGCGTCGCTCGCAGGCCGGCGGCATACCGCACGCTCCTCCGTTTGCCCGAGCTTTACCGCGTATGGACTTCGC
CCTCGCACCGGGGGCGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLDRFIPEFDRALRAVAGVTRASRPNPADAVIASAASTNTADNATKLSEADRRHAAGLMRVNHVGEVCAQALYQGQALFA
RDPAIRTQLDEAAREEEDHLAWCAQRLQELNDRPSLLNPLWYAGAFAIGAVAGRLGDKISLGFVAETERQVEHHLDGHLD
TLPEQDTRSRAIVAQMRDDEIRHGDNARQAGGIDLPAPIRQAMRAASRVMTTAAYRI

Sequences:

>Translated_217_residues
MLDRFIPEFDRALRAVAGVTRASRPNPADAVIASAASTNTADNATKLSEADRRHAAGLMRVNHVGEVCAQALYQGQALFA
RDPAIRTQLDEAAREEEDHLAWCAQRLQELNDRPSLLNPLWYAGAFAIGAVAGRLGDKISLGFVAETERQVEHHLDGHLD
TLPEQDTRSRAIVAQMRDDEIRHGDNARQAGGIDLPAPIRQAMRAASRVMTTAAYRI
>Mature_217_residues
MLDRFIPEFDRALRAVAGVTRASRPNPADAVIASAASTNTADNATKLSEADRRHAAGLMRVNHVGEVCAQALYQGQALFA
RDPAIRTQLDEAAREEEDHLAWCAQRLQELNDRPSLLNPLWYAGAFAIGAVAGRLGDKISLGFVAETERQVEHHLDGHLD
TLPEQDTRSRAIVAQMRDDEIRHGDNARQAGGIDLPAPIRQAMRAASRVMTTAAYRI

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family

Homologues:

Organism=Homo sapiens, GI25453484, Length=158, Percent_Identity=30.379746835443, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI300244542, Length=154, Percent_Identity=30.5194805194805, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324699, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640215, Length=150, Percent_Identity=28, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COQ7_RALPJ (B2UCY7)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001900654.1
- ProteinModelPortal:   B2UCY7
- GeneID:   6288972
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_3099
- HOGENOM:   HBG289195
- OMA:   YQGQALT
- ProtClustDB:   CLSK866016
- HAMAP:   MF_01658
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566
- Gene3D:   G3DSA:1.20.1260.10
- PANTHER:   PTHR11237

Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like

EC number: 1.14.13.-

Molecular weight: Translated: 23754; Mature: 23754

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRFIPEFDRALRAVAGVTRASRPNPADAVIASAASTNTADNATKLSEADRRHAAGLMR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VNHVGEVCAQALYQGQALFARDPAIRTQLDEAAREEEDHLAWCAQRLQELNDRPSLLNPL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WYAGAFAIGAVAGRLGDKISLGFVAETERQVEHHLDGHLDTLPEQDTRSRAIVAQMRDDE
HHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
IRHGDNARQAGGIDLPAPIRQAMRAASRVMTTAAYRI
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDRFIPEFDRALRAVAGVTRASRPNPADAVIASAASTNTADNATKLSEADRRHAAGLMR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VNHVGEVCAQALYQGQALFARDPAIRTQLDEAAREEEDHLAWCAQRLQELNDRPSLLNPL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WYAGAFAIGAVAGRLGDKISLGFVAETERQVEHHLDGHLDTLPEQDTRSRAIVAQMRDDE
HHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
IRHGDNARQAGGIDLPAPIRQAMRAASRVMTTAAYRI
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA