| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is maeB [H]
Identifier: 187930081
GI number: 187930081
Start: 3141120
End: 3143465
Strand: Reverse
Name: maeB [H]
Synonym: Rpic_3013
Alternate gene names: 187930081
Gene position: 3143465-3141120 (Counterclockwise)
Preceding gene: 187930085
Following gene: 187930080
Centisome position: 79.73
GC content: 62.87
Gene sequence:
>2346_bases ATGACCACGGTGGATACCCAGCCTCAGCAGCCCGCCCGCACGGATGAAGAACTCAAGGCGCAGCAGCGCGCCGCCTTGCG CAAGGCCGCGCTGGAGTACCACGAGTTTCCGACCCCGGGCAAGATTTCCGTCACGCCGACCAAGCCGCTGTCGAACCAGC GCGACCTCGCCCTGGCGTATTCACCGGGTGTTGCCGCCGCCTGTGAAGAGATCGTCGAAGACGTTACCAACTCGTTCCGC TACACCGCCCGCGGCAACCTCGTCGGCGTGGTGACCAACGGTACGGCCGTGCTCGGCCTGGGCGATATCGGCCCGGAAGC CTCGAAGCCGGTCATGGAAGGCAAGGCGGGCCTGTTCAAGAAATTCGCTGGTATCGATGTGTTTGATATCGAGATCAACG AAAAAGACCCCCAAAAGCTTGTCGATATCATCGCCTCGCTGGAGCCGACCTTCGGCGGCATCAACCTCGAAGATATCAAG GCACCGGAGTGCTTCTTCGTCGAGCGCGAACTGCGCAAGCGCATGAAGATCCCCGTCTTCCATGATGACCAGCACGGCAC CGCCATCGTCGTGGGCGCAGGCATCACCAATGCGCTCAAGGTGGTCGGCAAGGACATCAAGAAGGTCAAGCTGGTGGCGT CGGGCGCGGGCGCTGCGGCGCTGGCCTGCCTGGACTTGCTGGTCGACCTCGGCCTGCCGCGCGAAAACATCTGGGTGACG GACTTGGCCGGTGTGGTCTACGAAGGCCGTACCGAACTGATGGATCCGGACAAGGCGCACTTCGCACAGAAGACCGATCT GCGTACGTTGGCCGAAGTCATCGATGGCGCTGACATTTTCCTGGGCCTGTCCGCCGCCGGCGTGCTTAAGCAGGACATGG TCAAGAAGATGGCCGACAAGCCGATCATCTTCGCGCTGGCCAATCCGAACCCGGAAATCCTGCCGGAACTGGCCAAGGAA GTGCGCCCGGACGTCATCATGGGCACCGGCCGCACGGATTACCCGAACCAGGTCAACAACGTCCTGTGCTTCCCGTTCAT CTTCCGCGGCGCGCTGGATGTGGGCGCGACCACCATCACGCGTGAGATGGAAGTTGCCGCCGTGCACGCCGTGGCTGAAC TGGCTCGCCAGGAGCAAAGCGACATCGTCGCTTCCGCCTACGGCATCCAGGACTTGTCGTTCGGCCCCGAATACCTGATC CCGAAGCCCTTCGACCCGCGCCTGATTGTCAAGATCGCGCCGGCCGTGGCGCAGGCGGCCATGCTCTCGGGCGTGGCGCA GCGTCCGATCGAAGACATGGACGCCTACCGCCAGCACCTGCAGCAATTCGTCTACCACTCGGGCACGCTGATGAAGCCGA TCTTCTCGGCCGCCCGCAAGGTGCCGATGGAGAACAAGCGCATCATCTTTGCCGAAGGCGAAGAAGAGCGCGTGCTGCGT GCCGTGCAGATCGTTGTGGATGAAAAGCTCGCCAGCCCGATCCTGATCGGCCGCCCGAGCGTGATTGCCCACCGCATCGA ACGCTTCGGCCTGCGTCTGCGTGAAGGCGTGGATTTCACCGTGGTGAACCCCGAGCACGACGAGCGCTTCCGCGACTACT GGGAAACGTACTACAAGCTGATGGCGCGCAAGGGCGTGACGCCGCAGTACGCGAAGCTGGAAGTGCGCCGCCGTTCGACG CTGATCGGCGCCGTCATGATCCACAAGGGCGAAGCCGACGGCATGATTTGCGGCACGGTCAGCACCACCGCTGCGCACCT GCGCTACATCGACCAGGTCATCGGTGGCACGAACTGCGTGTACGCCGCCATGAACGGTCTGGTCCTGCCTGGCCGTCAGA TCTTCTTGACAGATACGCACGTCAATATCGACCCCACTGCCGAGCAACTGGCCGAGATCACCATCATGGCCGCCGAGGAA CTGTGCCGCTTCGGCATCAAGCCAAAGGTTGCGCTGATGTCGCACTCGAACTTCGGTTCGTCGGAGGCGCCTTCTGCCGT CAAGATGCGCGAAACGCTGGCTATCCTGCGCGAACGCGCCCCGAACCTGGAAGTGGACGGTGAGATGCATGGCGACGCCG CGCTCGACGAGAAGCTGCGGGACTCGCTGGTGCCGGATTCGACGCTCAAGGGCGAAGCCAACCTGTTGGTCATGCCGAAT ATCGATGCCGCCAACATCGCCTATAACCTGCTGAAGGCGGCCGCCGGCAACAACATCGCCATCGGCCCGATCCTGCTGGG CGCAAAAAAGCCGGTGCACATCCTCACGCCGTCGGCAACGGTGCGACGTATCCTCAACATGACGGCCCTGACCGTTGTGG ATGCCGCTGCACAAGCGCAACGCTGA
Upstream 100 bases:
>100_bases AGGAGGCGGACCGTATTCCCGTGGCGCTCGTGAGGGTATCCCGGTGGCCCGCTAGATGCGACGGCCGGCGCGCGCGCTGG CCACCCGATACGAGAGACCC
Downstream 100 bases:
>100_bases TCGCCACTGCACTGGAAAAGGGAGCGCACGATGCTGCGCTCCCTTTTTTAATTCACTAAGTTTGCGTGTGCTTACATTTC TTAAGACGTAATAGCCATAT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MTTVDTQPQQPARTDEELKAQQRAALRKAALEYHEFPTPGKISVTPTKPLSNQRDLALAYSPGVAAACEEIVEDVTNSFR YTARGNLVGVVTNGTAVLGLGDIGPEASKPVMEGKAGLFKKFAGIDVFDIEINEKDPQKLVDIIASLEPTFGGINLEDIK APECFFVERELRKRMKIPVFHDDQHGTAIVVGAGITNALKVVGKDIKKVKLVASGAGAAALACLDLLVDLGLPRENIWVT DLAGVVYEGRTELMDPDKAHFAQKTDLRTLAEVIDGADIFLGLSAAGVLKQDMVKKMADKPIIFALANPNPEILPELAKE VRPDVIMGTGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEVAAVHAVAELARQEQSDIVASAYGIQDLSFGPEYLI PKPFDPRLIVKIAPAVAQAAMLSGVAQRPIEDMDAYRQHLQQFVYHSGTLMKPIFSAARKVPMENKRIIFAEGEEERVLR AVQIVVDEKLASPILIGRPSVIAHRIERFGLRLREGVDFTVVNPEHDERFRDYWETYYKLMARKGVTPQYAKLEVRRRST LIGAVMIHKGEADGMICGTVSTTAAHLRYIDQVIGGTNCVYAAMNGLVLPGRQIFLTDTHVNIDPTAEQLAEITIMAAEE LCRFGIKPKVALMSHSNFGSSEAPSAVKMRETLAILRERAPNLEVDGEMHGDAALDEKLRDSLVPDSTLKGEANLLVMPN IDAANIAYNLLKAAAGNNIAIGPILLGAKKPVHILTPSATVRRILNMTALTVVDAAAQAQR
Sequences:
>Translated_781_residues MTTVDTQPQQPARTDEELKAQQRAALRKAALEYHEFPTPGKISVTPTKPLSNQRDLALAYSPGVAAACEEIVEDVTNSFR YTARGNLVGVVTNGTAVLGLGDIGPEASKPVMEGKAGLFKKFAGIDVFDIEINEKDPQKLVDIIASLEPTFGGINLEDIK APECFFVERELRKRMKIPVFHDDQHGTAIVVGAGITNALKVVGKDIKKVKLVASGAGAAALACLDLLVDLGLPRENIWVT DLAGVVYEGRTELMDPDKAHFAQKTDLRTLAEVIDGADIFLGLSAAGVLKQDMVKKMADKPIIFALANPNPEILPELAKE VRPDVIMGTGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEVAAVHAVAELARQEQSDIVASAYGIQDLSFGPEYLI PKPFDPRLIVKIAPAVAQAAMLSGVAQRPIEDMDAYRQHLQQFVYHSGTLMKPIFSAARKVPMENKRIIFAEGEEERVLR AVQIVVDEKLASPILIGRPSVIAHRIERFGLRLREGVDFTVVNPEHDERFRDYWETYYKLMARKGVTPQYAKLEVRRRST LIGAVMIHKGEADGMICGTVSTTAAHLRYIDQVIGGTNCVYAAMNGLVLPGRQIFLTDTHVNIDPTAEQLAEITIMAAEE LCRFGIKPKVALMSHSNFGSSEAPSAVKMRETLAILRERAPNLEVDGEMHGDAALDEKLRDSLVPDSTLKGEANLLVMPN IDAANIAYNLLKAAAGNNIAIGPILLGAKKPVHILTPSATVRRILNMTALTVVDAAAQAQR >Mature_780_residues TTVDTQPQQPARTDEELKAQQRAALRKAALEYHEFPTPGKISVTPTKPLSNQRDLALAYSPGVAAACEEIVEDVTNSFRY TARGNLVGVVTNGTAVLGLGDIGPEASKPVMEGKAGLFKKFAGIDVFDIEINEKDPQKLVDIIASLEPTFGGINLEDIKA PECFFVERELRKRMKIPVFHDDQHGTAIVVGAGITNALKVVGKDIKKVKLVASGAGAAALACLDLLVDLGLPRENIWVTD LAGVVYEGRTELMDPDKAHFAQKTDLRTLAEVIDGADIFLGLSAAGVLKQDMVKKMADKPIIFALANPNPEILPELAKEV RPDVIMGTGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEVAAVHAVAELARQEQSDIVASAYGIQDLSFGPEYLIP KPFDPRLIVKIAPAVAQAAMLSGVAQRPIEDMDAYRQHLQQFVYHSGTLMKPIFSAARKVPMENKRIIFAEGEEERVLRA VQIVVDEKLASPILIGRPSVIAHRIERFGLRLREGVDFTVVNPEHDERFRDYWETYYKLMARKGVTPQYAKLEVRRRSTL IGAVMIHKGEADGMICGTVSTTAAHLRYIDQVIGGTNCVYAAMNGLVLPGRQIFLTDTHVNIDPTAEQLAEITIMAAEEL CRFGIKPKVALMSHSNFGSSEAPSAVKMRETLAILRERAPNLEVDGEMHGDAALDEKLRDSLVPDSTLKGEANLLVMPNI DAANIAYNLLKAAAGNNIAIGPILLGAKKPVHILTPSATVRRILNMTALTVVDAAAQAQR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=344, Percent_Identity=27.6162790697674, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI62420882, Length=353, Percent_Identity=28.8951841359773, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI62420880, Length=353, Percent_Identity=28.8951841359773, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI239049447, Length=353, Percent_Identity=28.8951841359773, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI4505145, Length=319, Percent_Identity=30.4075235109718, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI270265879, Length=319, Percent_Identity=30.4075235109718, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1788806, Length=756, Percent_Identity=62.8306878306878, Blast_Score=978, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=316, Percent_Identity=33.2278481012658, Blast_Score=161, Evalue=2e-40, Organism=Escherichia coli, GI1788800, Length=321, Percent_Identity=31.7757009345794, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI87081919, Length=409, Percent_Identity=24.2053789731051, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537199, Length=421, Percent_Identity=26.3657957244656, Blast_Score=75, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=30.9623430962343, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI281362672, Length=404, Percent_Identity=28.4653465346535, Blast_Score=98, Evalue=3e-20, Organism=Drosophila melanogaster, GI281362674, Length=404, Percent_Identity=28.4653465346535, Blast_Score=98, Evalue=3e-20, Organism=Drosophila melanogaster, GI21356279, Length=404, Percent_Identity=28.4653465346535, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24646388, Length=350, Percent_Identity=30, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24646386, Length=350, Percent_Identity=30, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 85043; Mature: 84912
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVDTQPQQPARTDEELKAQQRAALRKAALEYHEFPTPGKISVTPTKPLSNQRDLALAY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEE SPGVAAACEEIVEDVTNSFRYTARGNLVGVVTNGTAVLGLGDIGPEASKPVMEGKAGLFK CCCHHHHHHHHHHHHHHCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHCCHHHHH KFAGIDVFDIEINEKDPQKLVDIIASLEPTFGGINLEDIKAPECFFVERELRKRMKIPVF HHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEE HDDQHGTAIVVGAGITNALKVVGKDIKKVKLVASGAGAAALACLDLLVDLGLPRENIWVT ECCCCCCEEEEECCHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEE DLAGVVYEGRTELMDPDKAHFAQKTDLRTLAEVIDGADIFLGLSAAGVLKQDMVKKMADK HHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCC PIIFALANPNPEILPELAKEVRPDVIMGTGRTDYPNQVNNVLCFPFIFRGALDVGATTIT CEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHH REMEVAAVHAVAELARQEQSDIVASAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH MLSGVAQRPIEDMDAYRQHLQQFVYHSGTLMKPIFSAARKVPMENKRIIFAEGEEERVLR HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH AVQIVVDEKLASPILIGRPSVIAHRIERFGLRLREGVDFTVVNPEHDERFRDYWETYYKL HHHHHHHHHHCCCEEECCCHHHHHHHHHHCHHHHCCCCEEEECCCHHHHHHHHHHHHHHH MARKGVTPQYAKLEVRRRSTLIGAVMIHKGEADGMICGTVSTTAAHLRYIDQVIGGTNCV HHHCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCHHH YAAMNGLVLPGRQIFLTDTHVNIDPTAEQLAEITIMAAEELCRFGIKPKVALMSHSNFGS HHHHCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SEAPSAVKMRETLAILRERAPNLEVDGEMHGDAALDEKLRDSLVPDSTLKGEANLLVMPN CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECC IDAANIAYNLLKAAAGNNIAIGPILLGAKKPVHILTPSATVRRILNMTALTVVDAAAQAQ CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC R C >Mature Secondary Structure TTVDTQPQQPARTDEELKAQQRAALRKAALEYHEFPTPGKISVTPTKPLSNQRDLALAY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEE SPGVAAACEEIVEDVTNSFRYTARGNLVGVVTNGTAVLGLGDIGPEASKPVMEGKAGLFK CCCHHHHHHHHHHHHHHCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHCCHHHHH KFAGIDVFDIEINEKDPQKLVDIIASLEPTFGGINLEDIKAPECFFVERELRKRMKIPVF HHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEE HDDQHGTAIVVGAGITNALKVVGKDIKKVKLVASGAGAAALACLDLLVDLGLPRENIWVT ECCCCCCEEEEECCHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEE DLAGVVYEGRTELMDPDKAHFAQKTDLRTLAEVIDGADIFLGLSAAGVLKQDMVKKMADK HHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCC PIIFALANPNPEILPELAKEVRPDVIMGTGRTDYPNQVNNVLCFPFIFRGALDVGATTIT CEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHH REMEVAAVHAVAELARQEQSDIVASAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH MLSGVAQRPIEDMDAYRQHLQQFVYHSGTLMKPIFSAARKVPMENKRIIFAEGEEERVLR HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH AVQIVVDEKLASPILIGRPSVIAHRIERFGLRLREGVDFTVVNPEHDERFRDYWETYYKL HHHHHHHHHHCCCEEECCCHHHHHHHHHHCHHHHCCCCEEEECCCHHHHHHHHHHHHHHH MARKGVTPQYAKLEVRRRSTLIGAVMIHKGEADGMICGTVSTTAAHLRYIDQVIGGTNCV HHHCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCHHH YAAMNGLVLPGRQIFLTDTHVNIDPTAEQLAEITIMAAEELCRFGIKPKVALMSHSNFGS HHHHCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SEAPSAVKMRETLAILRERAPNLEVDGEMHGDAALDEKLRDSLVPDSTLKGEANLLVMPN CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECC IDAANIAYNLLKAAAGNNIAIGPILLGAKKPVHILTPSATVRRILNMTALTVVDAAAQAQ CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]