| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187929999
Identifier: 187929999
GI number: 187929999
Start: 3044415
End: 3047024
Strand: Reverse
Name: 187929999
Synonym: Rpic_2931
Alternate gene names: NA
Gene position: 3047024-3044415 (Counterclockwise)
Preceding gene: 187930002
Following gene: 187929998
Centisome position: 77.29
GC content: 52.53
Gene sequence:
>2610_bases ATGGACGCACTTAGTGAGGCACAGCGCAACTGGATAGATGGCGCTCCCATTATTCCTGCCACGTTGACGGTACGAGCACT CGATGGCCAGTCAACGCATACCTATGAAGTTCTGGATCGAGATGCGGAGGGGCGTGTGCACGGTTTGCACAAACGCCGCG GGTGGAAGGGGTTCGTCTTGAGGGTTCGCGACCCGGCGACCCATGAGGAGTTTGCTGCCAAGCTTGCAGTCCCCGGCGAC TACAAGCAGCCACGGCTCGAGCAAGAGCTGCTGTATACATCCAAACTTCGTCCAGCTAAATCGCTCTTTGTTTGCCCGAT GTCAGTCGGCCTTTCTGCGCCGCCGCCGGGTATGCCGGATGCCGAAGAAGACTTTGTTTGCTTTATAGCCCCCTGGGTTA CGGGGAGGACCTTGGAGCAGTATCTCCAAGAGGACTCGCTCGAGATCGATTTTGTCTGCAGTGTAGCAATGCAGGTGCTT CGAGCTATCACCTACCTCAAGCGGGTTGAGTTGAAACATGACGATCTGCACGTGGGCAACGTCATGATTTCTCAGGTGCC AGCGGAATTGGCTCTGCTCGCTGATGACGAGCATCGATTGGAAGTATCAATTATCGATTTGGGTAGTCTAAAACCATCCA ATCAGACTACAAGCAAGAGCCGAGACGACAAAATCTGTTTTGTTCAGATATTGGTGGAGCTTTACAACGGTCTACATCGG AACCGTCGTGTCGCCTCCAGTCACCCTCACTTCATGCGCCGGTTCCTGCAGTTCATCGAAAAGTTGGTGGATGAGGACCA GGCGAGGCATTTTCCGATTGAGAACCAAATTGCCCAGGAGTTGCAAGTTCTTCAGCGTGAACTCGAAGAGGTGGAGATTG ATGAGTCAAAGTTCCAGCCGTTTGAGGCCATTTCGGCCGAGCATTTAGCCGACGACGCGACGCTGCTGGAGCTTTTCGTT GAAACATTGCCGTGGATGCAGGACATCCAGGAGCGTAAACCTATCGTGCTCACTGGTCCACGCGGGTGCGGTAAGTCAAT GATATTCCGCTATCTTGCAGTAAGAACACATTTGGGCTTACGTGCTCAGAATGCGGAACGCGGACGTGCAAGCCCTTTTG ACTCTTTTGGGGTATATATCAGTTGCGCTGCACATCTTCAAAACAACCTTAGCTGGTTGGCTCGCAAGGAGGGGCGCGCT GAGCAGAGGGCGCATGAGATTGCAACTTACTTCCAATTGATAGTTGCTCGTGAGCTTCTAAAATCTCTTGGTATGGCCTA TGCCGATTCAGTGGCGAACCGCGCTTTTCGACTAGATGAAGCTGGTTTCGATAATATCGTTGCACTTATCTCGTCGTACT TCAGTCGTCCCGTTGAATCGGCAAGACTGACCAATCGCAGTCGCATCCTTCATTTCGCAGATGACCTTGATGCCTTACGG GTTCAGCTCCATGGAACTTTGCTTCGAGATGGCGAATGGAACGATCATCTTCCGGATACGTTCCTTGCTGATCTAACTGG AAAGTTGGGATCTGTCTTCCCTTACTTCAAGAGGCATCAAGTGGTATTCCTGTTGGATGACTACTCGTCAAACCGAGTGC AGGAAGAAATTCAACGAATACTTAATAAGATAATTTTTGAGCGCGTTCCAACTCACTACTTCAAGATTTCCTGCGAGAAG TTCGGTTTTGATCCGGGCGATATCGATGGGGTCACACTAGAGGAGACGCGCGAGTTCACCACTATCGACGCAGGTAGCCG AGCTTTGGCGGACGTCGATGATCATGCTGCGAAACGGTTTGTGACGAACCTGATTGATCGACGGCTGAGCAGAGCTGGTT GGGCGGGGCGGGCAGAGAAGCTTATTGGATCTTCGGAACCATATGCTGATGATGTTCAGCTTGCCAGCTATATTCGCGAG CATGGCAGTACTCAGGGGCGTCGCTACTACTATCATGGGTTGCACGCTCTTGGGCGGCTATGGAGTGGCGATACCGCCAC GGTTTTACAGATCGTTCGTGAGATGTTCGTCAAGGGAAGCGTGCAGCGCGATACCACGGCACCCATTACCAAGGCTGCTC AACACGAGGCGATCGTTTCTATCTCAAAGGCGTTCAAGGAGCGCGTGGATGGTTTGCATCCATTCGGAGCGCTAATGGCC AAGATTCTTGGACAGTACGGAGCGGCCGTCCGTGACGTGATGGTTAAGGGGCGACTGAACTCTGCGAAGGAGCCGTATCG ACTTTACCGTCTGGAGATGACCAAGGATGAACCGAGATCGACGATTGCCTTGTTACGTGATCTTGACCCAGAGCTAGGAT CTCTCGCGCGCGAGCTTCTCCGGCGAGCGATCTTTATTGAGCTACAAGACAGTCGCGCCAAGGAGGGGCTTTCAAAGCAA ACTATGCGTTGGGAGTTGCGGCGAATATTCAATCCAGCATTCGGACTTTCGCTCAAGCGTGATAGTTATCTAGGGGTGCG CGACATTGAGGAGCTGCAAACATTCCTGACGGCTCCGGAGCGTTTTGCGGATCGAGCAAGGATGTCGTATGCCACCAAGA GCGGCGCGGATCGGTTCAGTGGGGAATTGTTCGAGGATACAGATGACTGA
Upstream 100 bases:
>100_bases CGTGCAGGTCAGGCCTACGTGTGCCGGCCGTACGGTAGTGGGGATGGCGATTGCAACTTCGGCGATGGTCGACGTAGCGC AGATCATAGGCAACAAAACA
Downstream 100 bases:
>100_bases CAAGCAGGCTTTCGTCAAACGAATTTGCTTTGACGATGTACAGGTGTCTCTTCCCGAAGTTGAACCGTGGGATGGAGATG AGGTTTCTCCCGATCTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MDALSEAQRNWIDGAPIIPATLTVRALDGQSTHTYEVLDRDAEGRVHGLHKRRGWKGFVLRVRDPATHEEFAAKLAVPGD YKQPRLEQELLYTSKLRPAKSLFVCPMSVGLSAPPPGMPDAEEDFVCFIAPWVTGRTLEQYLQEDSLEIDFVCSVAMQVL RAITYLKRVELKHDDLHVGNVMISQVPAELALLADDEHRLEVSIIDLGSLKPSNQTTSKSRDDKICFVQILVELYNGLHR NRRVASSHPHFMRRFLQFIEKLVDEDQARHFPIENQIAQELQVLQRELEEVEIDESKFQPFEAISAEHLADDATLLELFV ETLPWMQDIQERKPIVLTGPRGCGKSMIFRYLAVRTHLGLRAQNAERGRASPFDSFGVYISCAAHLQNNLSWLARKEGRA EQRAHEIATYFQLIVARELLKSLGMAYADSVANRAFRLDEAGFDNIVALISSYFSRPVESARLTNRSRILHFADDLDALR VQLHGTLLRDGEWNDHLPDTFLADLTGKLGSVFPYFKRHQVVFLLDDYSSNRVQEEIQRILNKIIFERVPTHYFKISCEK FGFDPGDIDGVTLEETREFTTIDAGSRALADVDDHAAKRFVTNLIDRRLSRAGWAGRAEKLIGSSEPYADDVQLASYIRE HGSTQGRRYYYHGLHALGRLWSGDTATVLQIVREMFVKGSVQRDTTAPITKAAQHEAIVSISKAFKERVDGLHPFGALMA KILGQYGAAVRDVMVKGRLNSAKEPYRLYRLEMTKDEPRSTIALLRDLDPELGSLARELLRRAIFIELQDSRAKEGLSKQ TMRWELRRIFNPAFGLSLKRDSYLGVRDIEELQTFLTAPERFADRARMSYATKSGADRFSGELFEDTDD
Sequences:
>Translated_869_residues MDALSEAQRNWIDGAPIIPATLTVRALDGQSTHTYEVLDRDAEGRVHGLHKRRGWKGFVLRVRDPATHEEFAAKLAVPGD YKQPRLEQELLYTSKLRPAKSLFVCPMSVGLSAPPPGMPDAEEDFVCFIAPWVTGRTLEQYLQEDSLEIDFVCSVAMQVL RAITYLKRVELKHDDLHVGNVMISQVPAELALLADDEHRLEVSIIDLGSLKPSNQTTSKSRDDKICFVQILVELYNGLHR NRRVASSHPHFMRRFLQFIEKLVDEDQARHFPIENQIAQELQVLQRELEEVEIDESKFQPFEAISAEHLADDATLLELFV ETLPWMQDIQERKPIVLTGPRGCGKSMIFRYLAVRTHLGLRAQNAERGRASPFDSFGVYISCAAHLQNNLSWLARKEGRA EQRAHEIATYFQLIVARELLKSLGMAYADSVANRAFRLDEAGFDNIVALISSYFSRPVESARLTNRSRILHFADDLDALR VQLHGTLLRDGEWNDHLPDTFLADLTGKLGSVFPYFKRHQVVFLLDDYSSNRVQEEIQRILNKIIFERVPTHYFKISCEK FGFDPGDIDGVTLEETREFTTIDAGSRALADVDDHAAKRFVTNLIDRRLSRAGWAGRAEKLIGSSEPYADDVQLASYIRE HGSTQGRRYYYHGLHALGRLWSGDTATVLQIVREMFVKGSVQRDTTAPITKAAQHEAIVSISKAFKERVDGLHPFGALMA KILGQYGAAVRDVMVKGRLNSAKEPYRLYRLEMTKDEPRSTIALLRDLDPELGSLARELLRRAIFIELQDSRAKEGLSKQ TMRWELRRIFNPAFGLSLKRDSYLGVRDIEELQTFLTAPERFADRARMSYATKSGADRFSGELFEDTDD >Mature_869_residues MDALSEAQRNWIDGAPIIPATLTVRALDGQSTHTYEVLDRDAEGRVHGLHKRRGWKGFVLRVRDPATHEEFAAKLAVPGD YKQPRLEQELLYTSKLRPAKSLFVCPMSVGLSAPPPGMPDAEEDFVCFIAPWVTGRTLEQYLQEDSLEIDFVCSVAMQVL RAITYLKRVELKHDDLHVGNVMISQVPAELALLADDEHRLEVSIIDLGSLKPSNQTTSKSRDDKICFVQILVELYNGLHR NRRVASSHPHFMRRFLQFIEKLVDEDQARHFPIENQIAQELQVLQRELEEVEIDESKFQPFEAISAEHLADDATLLELFV ETLPWMQDIQERKPIVLTGPRGCGKSMIFRYLAVRTHLGLRAQNAERGRASPFDSFGVYISCAAHLQNNLSWLARKEGRA EQRAHEIATYFQLIVARELLKSLGMAYADSVANRAFRLDEAGFDNIVALISSYFSRPVESARLTNRSRILHFADDLDALR VQLHGTLLRDGEWNDHLPDTFLADLTGKLGSVFPYFKRHQVVFLLDDYSSNRVQEEIQRILNKIIFERVPTHYFKISCEK FGFDPGDIDGVTLEETREFTTIDAGSRALADVDDHAAKRFVTNLIDRRLSRAGWAGRAEKLIGSSEPYADDVQLASYIRE HGSTQGRRYYYHGLHALGRLWSGDTATVLQIVREMFVKGSVQRDTTAPITKAAQHEAIVSISKAFKERVDGLHPFGALMA KILGQYGAAVRDVMVKGRLNSAKEPYRLYRLEMTKDEPRSTIALLRDLDPELGSLARELLRRAIFIELQDSRAKEGLSKQ TMRWELRRIFNPAFGLSLKRDSYLGVRDIEELQTFLTAPERFADRARMSYATKSGADRFSGELFEDTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98792; Mature: 98792
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALSEAQRNWIDGAPIIPATLTVRALDGQSTHTYEVLDRDAEGRVHGLHKRRGWKGFVL CCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHCCCCCEEEE RVRDPATHEEFAAKLAVPGDYKQPRLEQELLYTSKLRPAKSLFVCPMSVGLSAPPPGMPD EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEHHHCCCCCCCCCCCC AEEDFVCFIAPWVTGRTLEQYLQEDSLEIDFVCSVAMQVLRAITYLKRVELKHDDLHVGN CCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH VMISQVPAELALLADDEHRLEVSIIDLGSLKPSNQTTSKSRDDKICFVQILVELYNGLHR HHHHHCCHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NRRVASSHPHFMRRFLQFIEKLVDEDQARHFPIENQIAQELQVLQRELEEVEIDESKFQP CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCC FEAISAEHLADDATLLELFVETLPWMQDIQERKPIVLTGPRGCGKSMIFRYLAVRTHLGL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC RAQNAERGRASPFDSFGVYISCAAHLQNNLSWLARKEGRAEQRAHEIATYFQLIVARELL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSLGMAYADSVANRAFRLDEAGFDNIVALISSYFSRPVESARLTNRSRILHFADDLDALR HHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHEEEHHHHHHHHH VQLHGTLLRDGEWNDHLPDTFLADLTGKLGSVFPYFKRHQVVFLLDDYSSNRVQEEIQRI HHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEECCCCHHHHHHHHHH LNKIIFERVPTHYFKISCEKFGFDPGDIDGVTLEETREFTTIDAGSRALADVDDHAAKRF HHHHHHHHCCCHHEEEEHHHCCCCCCCCCCCCHHHCCCEEEECCCCCHHHCHHHHHHHHH VTNLIDRRLSRAGWAGRAEKLIGSSEPYADDVQLASYIREHGSTQGRRYYYHGLHALGRL HHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH WSGDTATVLQIVREMFVKGSVQRDTTAPITKAAQHEAIVSISKAFKERVDGLHPFGALMA CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KILGQYGAAVRDVMVKGRLNSAKEPYRLYRLEMTKDEPRSTIALLRDLDPELGSLARELL HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH RRAIFIELQDSRAKEGLSKQTMRWELRRIFNPAFGLSLKRDSYLGVRDIEELQTFLTAPE HHHHEEEECCHHHHCCHHHHHHHHHHHHHHCHHHCCEECCCCCCCHHHHHHHHHHHCCHH RFADRARMSYATKSGADRFSGELFEDTDD HHHHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure MDALSEAQRNWIDGAPIIPATLTVRALDGQSTHTYEVLDRDAEGRVHGLHKRRGWKGFVL CCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHCCCCCEEEE RVRDPATHEEFAAKLAVPGDYKQPRLEQELLYTSKLRPAKSLFVCPMSVGLSAPPPGMPD EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEHHHCCCCCCCCCCCC AEEDFVCFIAPWVTGRTLEQYLQEDSLEIDFVCSVAMQVLRAITYLKRVELKHDDLHVGN CCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH VMISQVPAELALLADDEHRLEVSIIDLGSLKPSNQTTSKSRDDKICFVQILVELYNGLHR HHHHHCCHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NRRVASSHPHFMRRFLQFIEKLVDEDQARHFPIENQIAQELQVLQRELEEVEIDESKFQP CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCC FEAISAEHLADDATLLELFVETLPWMQDIQERKPIVLTGPRGCGKSMIFRYLAVRTHLGL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC RAQNAERGRASPFDSFGVYISCAAHLQNNLSWLARKEGRAEQRAHEIATYFQLIVARELL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSLGMAYADSVANRAFRLDEAGFDNIVALISSYFSRPVESARLTNRSRILHFADDLDALR HHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHEEEHHHHHHHHH VQLHGTLLRDGEWNDHLPDTFLADLTGKLGSVFPYFKRHQVVFLLDDYSSNRVQEEIQRI HHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEECCCCHHHHHHHHHH LNKIIFERVPTHYFKISCEKFGFDPGDIDGVTLEETREFTTIDAGSRALADVDDHAAKRF HHHHHHHHCCCHHEEEEHHHCCCCCCCCCCCCHHHCCCEEEECCCCCHHHCHHHHHHHHH VTNLIDRRLSRAGWAGRAEKLIGSSEPYADDVQLASYIREHGSTQGRRYYYHGLHALGRL HHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH WSGDTATVLQIVREMFVKGSVQRDTTAPITKAAQHEAIVSISKAFKERVDGLHPFGALMA CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KILGQYGAAVRDVMVKGRLNSAKEPYRLYRLEMTKDEPRSTIALLRDLDPELGSLARELL HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH RRAIFIELQDSRAKEGLSKQTMRWELRRIFNPAFGLSLKRDSYLGVRDIEELQTFLTAPE HHHHEEEECCHHHHCCHHHHHHHHHHHHHHCHHHCCEECCCCCCCHHHHHHHHHHHCCHH RFADRARMSYATKSGADRFSGELFEDTDD HHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA