| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is btuE [C]
Identifier: 187929978
GI number: 187929978
Start: 3023397
End: 3023894
Strand: Reverse
Name: btuE [C]
Synonym: Rpic_2910
Alternate gene names: 187929978
Gene position: 3023894-3023397 (Counterclockwise)
Preceding gene: 187929979
Following gene: 187929967
Centisome position: 76.7
GC content: 61.04
Gene sequence:
>498_bases ATGAGTGACGTCTATGCATTCGAGGCCGATTCGTTAACCGGCCAGCGCGTGCCGCTGTCGCAGTACAAGGGCAAGGTCCT GCTGATCGTCAACACGGCGAGCAAGTGCGGATTCACGCCGCAGTACGCGGGGCTGGAGGCGGTGTACAAGCGGCTGCACG ACAAAGGGCTAGAGGTGCTCGGCTTTCCGTGCAACCAGTTCGGCAAGCAGGAACCGGGCGGCGAAGACGAGATCGGCGCC TTCTGCGAAAAGAACTACGGCGTCTCGTTTCCGATGTTCGGCAAGATCGACGTGAATGGCTCCAACGCGCATCCGCTCTA CAAGTGGCTGACCTCGGAAAAGCCCGGCGTGCTCGGTATCGGAGCCATCAAATGGAATTTCACCAAGTTCCTGCTGCGCC GCGACGGCACGGTCTACAAGCGCTACGCGCCCATGACCAAGCCGGAAGAGATTGCCGACGATATTGAGCGGCTGCTGGCG GAGCCCGATCCCGCCTGA
Upstream 100 bases:
>100_bases CACTGACCTGCATCTCCCAACGGCCCGCCCCGCGCGGGCCGTTACAATTCCGGCCAGATGCCGGAGCATTTCCGTTCCCG CAACCATCCGGAGAGTAGCC
Downstream 100 bases:
>100_bases CGTTGCGGTCGTCAATCCGACGAGCCTCGCACCTTGCGCATGAAATCCGCCAGCGAGCGCTCGGCGGATTCGGCAAAGTG GCGCTCCAGAATGTCGACCT
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSDVYAFEADSLTGQRVPLSQYKGKVLLIVNTASKCGFTPQYAGLEAVYKRLHDKGLEVLGFPCNQFGKQEPGGEDEIGA FCEKNYGVSFPMFGKIDVNGSNAHPLYKWLTSEKPGVLGIGAIKWNFTKFLLRRDGTVYKRYAPMTKPEEIADDIERLLA EPDPA
Sequences:
>Translated_165_residues MSDVYAFEADSLTGQRVPLSQYKGKVLLIVNTASKCGFTPQYAGLEAVYKRLHDKGLEVLGFPCNQFGKQEPGGEDEIGA FCEKNYGVSFPMFGKIDVNGSNAHPLYKWLTSEKPGVLGIGAIKWNFTKFLLRRDGTVYKRYAPMTKPEEIADDIERLLA EPDPA >Mature_164_residues SDVYAFEADSLTGQRVPLSQYKGKVLLIVNTASKCGFTPQYAGLEAVYKRLHDKGLEVLGFPCNQFGKQEPGGEDEIGAF CEKNYGVSFPMFGKIDVNGSNAHPLYKWLTSEKPGVLGIGAIKWNFTKFLLRRDGTVYKRYAPMTKPEEIADDIERLLAE PDPA
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=155, Percent_Identity=47.0967741935484, Blast_Score=138, Evalue=2e-33, Organism=Homo sapiens, GI90903240, Length=155, Percent_Identity=47.0967741935484, Blast_Score=137, Evalue=4e-33, Organism=Homo sapiens, GI15618997, Length=160, Percent_Identity=43.75, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI192455698, Length=162, Percent_Identity=39.5061728395062, Blast_Score=119, Evalue=1e-27, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=47.3282442748092, Blast_Score=114, Evalue=3e-26, Organism=Homo sapiens, GI4557629, Length=183, Percent_Identity=36.6120218579235, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI41406084, Length=188, Percent_Identity=37.2340425531915, Blast_Score=98, Evalue=3e-21, Organism=Homo sapiens, GI6006001, Length=177, Percent_Identity=37.2881355932203, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI33186887, Length=178, Percent_Identity=33.7078651685393, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI32967607, Length=179, Percent_Identity=31.8435754189944, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1788003, Length=171, Percent_Identity=44.4444444444444, Blast_Score=144, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17535473, Length=163, Percent_Identity=50.920245398773, Blast_Score=156, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17506887, Length=162, Percent_Identity=48.7654320987654, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71993584, Length=160, Percent_Identity=40, Blast_Score=127, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193210707, Length=163, Percent_Identity=41.1042944785276, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17550320, Length=182, Percent_Identity=35.1648351648352, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193209493, Length=182, Percent_Identity=33.5164835164835, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71993573, Length=97, Percent_Identity=37.1134020618557, Blast_Score=73, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71999642, Length=75, Percent_Identity=41.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507603, Length=108, Percent_Identity=37.037037037037, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322228, Length=161, Percent_Identity=57.1428571428571, Blast_Score=201, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6319721, Length=160, Percent_Identity=53.125, Blast_Score=189, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6322826, Length=162, Percent_Identity=45.0617283950617, Blast_Score=155, Evalue=4e-39, Organism=Drosophila melanogaster, GI24656772, Length=160, Percent_Identity=46.25, Blast_Score=143, Evalue=6e-35, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=46.25, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI24656767, Length=160, Percent_Identity=46.25, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=42.1383647798742, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 18329; Mature: 18198
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVYAFEADSLTGQRVPLSQYKGKVLLIVNTASKCGFTPQYAGLEAVYKRLHDKGLEVL CCCCEEEECCCCCCCCCCHHHHCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHCCCEEE GFPCNQFGKQEPGGEDEIGAFCEKNYGVSFPMFGKIDVNGSNAHPLYKWLTSEKPGVLGI ECCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEE GAIKWNFTKFLLRRDGTVYKRYAPMTKPEEIADDIERLLAEPDPA EEEHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDVYAFEADSLTGQRVPLSQYKGKVLLIVNTASKCGFTPQYAGLEAVYKRLHDKGLEVL CCCEEEECCCCCCCCCCHHHHCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHCCCEEE GFPCNQFGKQEPGGEDEIGAFCEKNYGVSFPMFGKIDVNGSNAHPLYKWLTSEKPGVLGI ECCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEE GAIKWNFTKFLLRRDGTVYKRYAPMTKPEEIADDIERLLAEPDPA EEEHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]