| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is glnH [H]
Identifier: 187929867
GI number: 187929867
Start: 2908008
End: 2908772
Strand: Reverse
Name: glnH [H]
Synonym: Rpic_2798
Alternate gene names: 187929867
Gene position: 2908772-2908008 (Counterclockwise)
Preceding gene: 187929868
Following gene: 187929866
Centisome position: 73.78
GC content: 63.66
Gene sequence:
>765_bases ATGGGGAATCGTCGTCAGTTCATGCATTCGATGCTGGCTTGTGCCGTGGCGTTGTCCGCTGCGGCGTCCTTCGCAACCGC TGCGCACGCTGCTGGGGAGCCGTTGCGGGTGGCTACCGACGCCACGTTCGCGCCGATGGAGTTTGTCGAAAACGGCAAGC GCACCGGCTTTGATGTGGACCTGATCGATGCGCTGGCCCGCACCCTGGGCCGCCCGGTCGAGTGGACCGACATCGACTTC AAGGGCCTCGTGCCGGGCCTGATCTCGCGCCGCTTCGACGTGGCCATTTCGGGCATCTACATCACGGAAGAGCGCAAGAA GGTGGTGGACTTCACGGTGCCGTACTACCACGGCGGCCTGGTCGCGCTGGTCAAGCAAGGCAACACGGCCATCAAGACGC CGGCGGATCTGAACGGCAAGAAGGTCAGCGTGCAGGTGGGCACCAAATCGGTCAACTACCTGCGCGAGAACTACCCGAAG GTCGAACGCGTGGAAGTCGAGAAGAACAACGAGATGTTCAACCTCGTCGAGATCGGCCGGGCCGATGCCGCTGTCACAGG CCGCCCCGCCGCCGCGTACTACGTGAAGGCGCGTCCGGGCCTGCGCCTGGTTGAGCCGGCACTCACCACCGAGGAATACG GCATCGCCGTGCGTCGCGATCAGCCCGAATTGACCAAGGCACTGAACGCCGCGCTGGAGAAGATCAAGGCGGACGGCACG TACGACCAGATCGTCAAGAAGTGGTTTGGCACCACCGCGAAGTAA
Upstream 100 bases:
>100_bases CGGCTGCGTCCATTTCTGCGCGATTGCAGGACCTCTGAATTTTCGATTTTTCCGCTTCGTTTTTTTCTCACCCCACATGC ATCACACAAGGAGACCACTC
Downstream 100 bases:
>100_bases CGACCGGACACGCTGATGGAACTGGATTTTTCTCCCGTCTGGGCCGGATGGCACGACATCCTGCGCGGTGCGATCGTCAC CGTTGAGGTGACGGCCGCCG
Product: family 3 extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MGNRRQFMHSMLACAVALSAAASFATAAHAAGEPLRVATDATFAPMEFVENGKRTGFDVDLIDALARTLGRPVEWTDIDF KGLVPGLISRRFDVAISGIYITEERKKVVDFTVPYYHGGLVALVKQGNTAIKTPADLNGKKVSVQVGTKSVNYLRENYPK VERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKARPGLRLVEPALTTEEYGIAVRRDQPELTKALNAALEKIKADGT YDQIVKKWFGTTAK
Sequences:
>Translated_254_residues MGNRRQFMHSMLACAVALSAAASFATAAHAAGEPLRVATDATFAPMEFVENGKRTGFDVDLIDALARTLGRPVEWTDIDF KGLVPGLISRRFDVAISGIYITEERKKVVDFTVPYYHGGLVALVKQGNTAIKTPADLNGKKVSVQVGTKSVNYLRENYPK VERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKARPGLRLVEPALTTEEYGIAVRRDQPELTKALNAALEKIKADGT YDQIVKKWFGTTAK >Mature_253_residues GNRRQFMHSMLACAVALSAAASFATAAHAAGEPLRVATDATFAPMEFVENGKRTGFDVDLIDALARTLGRPVEWTDIDFK GLVPGLISRRFDVAISGIYITEERKKVVDFTVPYYHGGLVALVKQGNTAIKTPADLNGKKVSVQVGTKSVNYLRENYPKV ERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKARPGLRLVEPALTTEEYGIAVRRDQPELTKALNAALEKIKADGTY DQIVKKWFGTTAK
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=38.1526104417671, Blast_Score=175, Evalue=2e-45, Organism=Escherichia coli, GI1787085, Length=234, Percent_Identity=36.3247863247863, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI1788228, Length=259, Percent_Identity=35.5212355212355, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1787088, Length=235, Percent_Identity=36.1702127659575, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788649, Length=249, Percent_Identity=29.718875502008, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1788648, Length=226, Percent_Identity=29.2035398230088, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27808; Mature: 27677
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNRRQFMHSMLACAVALSAAASFATAAHAAGEPLRVATDATFAPMEFVENGKRTGFDVD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCHH LIDALARTLGRPVEWTDIDFKGLVPGLISRRFDVAISGIYITEERKKVVDFTVPYYHGGL HHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCCCCE VALVKQGNTAIKTPADLNGKKVSVQVGTKSVNYLRENYPKVERVEVEKNNEMFNLVEIGR EEEEECCCCEECCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEECCCCEEEHEECCC ADAAVTGRPAAAYYVKARPGLRLVEPALTTEEYGIAVRRDQPELTKALNAALEKIKADGT CCCEECCCCCEEEEEECCCCCEEECCCCCHHHHCEEEECCCHHHHHHHHHHHHHHCCCCC YDQIVKKWFGTTAK HHHHHHHHCCCCCC >Mature Secondary Structure GNRRQFMHSMLACAVALSAAASFATAAHAAGEPLRVATDATFAPMEFVENGKRTGFDVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCHH LIDALARTLGRPVEWTDIDFKGLVPGLISRRFDVAISGIYITEERKKVVDFTVPYYHGGL HHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCCCCE VALVKQGNTAIKTPADLNGKKVSVQVGTKSVNYLRENYPKVERVEVEKNNEMFNLVEIGR EEEEECCCCEECCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEECCCCEEEHEECCC ADAAVTGRPAAAYYVKARPGLRLVEPALTTEEYGIAVRRDQPELTKALNAALEKIKADGT CCCEECCCCCEEEEEECCCCCEEECCCCCHHHHCEEEECCCHHHHHHHHHHHHHHCCCCC YDQIVKKWFGTTAK HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]