| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929850
Identifier: 187929850
GI number: 187929850
Start: 2892728
End: 2893534
Strand: Reverse
Name: 187929850
Synonym: Rpic_2781
Alternate gene names: NA
Gene position: 2893534-2892728 (Counterclockwise)
Preceding gene: 187929856
Following gene: 187929849
Centisome position: 73.39
GC content: 67.53
Gene sequence:
>807_bases ATGTCCATCACCACCGCGTCCATCGCCCGTTTCGAGATTGACGGCGTCGCTTACCAGGCGAGGCTGTTTGCCATGCCGTT CCACGTGCCGGAAAACGGCCGCGTGCGCGCACATGCGATCGGGCGTCCGGACATGCCGTTCAGCGGTGTGCACGTGCTGG CCGGGTGGCTGAAAGAGCGCGTGTTGCCCGAAGGCGTGTGCCTGGTGATGGCCGATCGCCTGTTCTCGCACGGCGCGGTG GAGCAGTGGTCGGGCGCCGACGGCGCGCGTGCGGCCAAGGTGCTGTCGCAGGTCGCACTTGGCAGCAAGAGCAGCCATCG CCTGTGGCGCAACACCGTGGCGGGTGGTTTCCGCGACGAGACCGCGTTCTTCCTGGGCGCCGCCTTTGTGCAGACCGATG CCCCCGTCGACGACATCCGCCTGCTGGGTGACCTGATTCCGGCGGCTGAATGGTCCAGCGTGGCCGATGCCGCCTCGACC ATGATGGGCCTGCACCTGTATCGCCCGGACGAGCCCGAAACGCTGGTCAGTTGCGCGCTGCTGGCACCGTCCTGGACGGA GGCCGCCGTGGAGCGCGCCGACGGCTACCGTGCACTCACGCTGCTGCATTCCTTTACCGAAGACGACGAGGTCATCCACG TCGACATCGAACTGCTGCCGCCGGGCCAGGTGGTGCTGCAGGTGGAGTCGTGCTCGACGCGCTTTTCTGCGCGCTTTGAC CCGGCGCTCCTGGGCCGCGACATGACCGACGCATTGCTGCGCGACGCACTGGCCCTGCAACACGGCGATCCGGCCAGCCT CCACTAA
Upstream 100 bases:
>100_bases CCTTCCCACAGCCCCCCATGTGGCGGCTAAACATTCGGCGTGGATGGTCGTTGATGCAGGTACGGGCGGCGTTTTCCGCC CCTTGTGCAGGAAGGTCATC
Downstream 100 bases:
>100_bases GCTTGCAGGCGGCTCTCGCGTCAGGTGGGCGAGCATGGGCAGGGCGAATTGCAGGGCGCGCTGGCGAGCCTCGCCAGCGT GGCCGCCATGATTGGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSITTASIARFEIDGVAYQARLFAMPFHVPENGRVRAHAIGRPDMPFSGVHVLAGWLKERVLPEGVCLVMADRLFSHGAV EQWSGADGARAAKVLSQVALGSKSSHRLWRNTVAGGFRDETAFFLGAAFVQTDAPVDDIRLLGDLIPAAEWSSVADAAST MMGLHLYRPDEPETLVSCALLAPSWTEAAVERADGYRALTLLHSFTEDDEVIHVDIELLPPGQVVLQVESCSTRFSARFD PALLGRDMTDALLRDALALQHGDPASLH
Sequences:
>Translated_268_residues MSITTASIARFEIDGVAYQARLFAMPFHVPENGRVRAHAIGRPDMPFSGVHVLAGWLKERVLPEGVCLVMADRLFSHGAV EQWSGADGARAAKVLSQVALGSKSSHRLWRNTVAGGFRDETAFFLGAAFVQTDAPVDDIRLLGDLIPAAEWSSVADAAST MMGLHLYRPDEPETLVSCALLAPSWTEAAVERADGYRALTLLHSFTEDDEVIHVDIELLPPGQVVLQVESCSTRFSARFD PALLGRDMTDALLRDALALQHGDPASLH >Mature_267_residues SITTASIARFEIDGVAYQARLFAMPFHVPENGRVRAHAIGRPDMPFSGVHVLAGWLKERVLPEGVCLVMADRLFSHGAVE QWSGADGARAAKVLSQVALGSKSSHRLWRNTVAGGFRDETAFFLGAAFVQTDAPVDDIRLLGDLIPAAEWSSVADAASTM MGLHLYRPDEPETLVSCALLAPSWTEAAVERADGYRALTLLHSFTEDDEVIHVDIELLPPGQVVLQVESCSTRFSARFDP ALLGRDMTDALLRDALALQHGDPASLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29055; Mature: 28924
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTASIARFEIDGVAYQARLFAMPFHVPENGRVRAHAIGRPDMPFSGVHVLAGWLKER CCCCCCCEEEEEECCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH VLPEGVCLVMADRLFSHGAVEQWSGADGARAAKVLSQVALGSKSSHRLWRNTVAGGFRDE CCCCCHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC TAFFLGAAFVQTDAPVDDIRLLGDLIPAAEWSSVADAASTMMGLHLYRPDEPETLVSCAL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH LAPSWTEAAVERADGYRALTLLHSFTEDDEVIHVDIELLPPGQVVLQVESCSTRFSARFD CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCC PALLGRDMTDALLRDALALQHGDPASLH HHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SITTASIARFEIDGVAYQARLFAMPFHVPENGRVRAHAIGRPDMPFSGVHVLAGWLKER CCCCCCEEEEEECCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH VLPEGVCLVMADRLFSHGAVEQWSGADGARAAKVLSQVALGSKSSHRLWRNTVAGGFRDE CCCCCHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC TAFFLGAAFVQTDAPVDDIRLLGDLIPAAEWSSVADAASTMMGLHLYRPDEPETLVSCAL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH LAPSWTEAAVERADGYRALTLLHSFTEDDEVIHVDIELLPPGQVVLQVESCSTRFSARFD CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCC PALLGRDMTDALLRDALALQHGDPASLH HHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA