| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929799
Identifier: 187929799
GI number: 187929799
Start: 2844930
End: 2845508
Strand: Reverse
Name: 187929799
Synonym: Rpic_2729
Alternate gene names: NA
Gene position: 2845508-2844930 (Counterclockwise)
Preceding gene: 187929803
Following gene: 187929794
Centisome position: 72.17
GC content: 67.01
Gene sequence:
>579_bases ATGGTTTTCGGTCGTTCCGCAGTTCGCAATGTTCTCGCCTGGATTGGCGGTTGCGCCATCGTGGCGGTGGTGGTCGGAGG TGCGCTCGTGTGTGGGGCGAAGGCATGGCTGCGCGAGGAGCCGAGGCTCGCACAGGCGGACGTGATCGTCGTGCTGGGCG GCGAATCGGGCCAGCGCGTGATCGGCGCCGCCGAGCTGTACCACGCGGGCGTTGCTCCCCGCGTGTTCGTCAGCGGGCAG GGCGATTGCCTGCTGATCGAACGTCGCCTGGTGATGGCGGGTGTGCCCGCAGAGCGCATCGGCCACGAATGTGTGTCTGG CAGCACGATGGAAAATGCGCGGATGACGCGCGGGACGCTAGCGGGCCAGCAGGTGCAAAGCGCAATACTGGTCACGAGCT GGTATCACACCGGCCGGGCGCTGGCGGTGTTCCGCAAGGTATGGCCGGAGGTCACCTGGGGTGCGCAGGGCGTATTCCCG GGCGACACGCTGGCCAAGTCGGTCCCGATCTACGAAGCCGGGTCGATTCTTGCGGAGTACGTCAAGCGGGCGTGGTATGC CGTCCGCTACCGGGCCTGA
Upstream 100 bases:
>100_bases AACCCGGTGCCCGGGCTTCCTGCTGAACAGTGGCGATGATACCGGCTTGCCCCGCGGCGCGTCTGGCGCTCGGGTTTTTC GTTAAGAGCGCATTCTCGAT
Downstream 100 bases:
>100_bases GCCTCATTTGGCTGGCATGGGCCGCGCATCGGCGGCCAGGTCGTCAAGCGAGGGCACGAAGCGGACCGTGTCGCGCTTGT TGGATTCCCGCACCCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVFGRSAVRNVLAWIGGCAIVAVVVGGALVCGAKAWLREEPRLAQADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGQ GDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTLAGQQVQSAILVTSWYHTGRALAVFRKVWPEVTWGAQGVFP GDTLAKSVPIYEAGSILAEYVKRAWYAVRYRA
Sequences:
>Translated_192_residues MVFGRSAVRNVLAWIGGCAIVAVVVGGALVCGAKAWLREEPRLAQADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGQ GDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTLAGQQVQSAILVTSWYHTGRALAVFRKVWPEVTWGAQGVFP GDTLAKSVPIYEAGSILAEYVKRAWYAVRYRA >Mature_192_residues MVFGRSAVRNVLAWIGGCAIVAVVVGGALVCGAKAWLREEPRLAQADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGQ GDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTLAGQQVQSAILVTSWYHTGRALAVFRKVWPEVTWGAQGVFP GDTLAKSVPIYEAGSILAEYVKRAWYAVRYRA
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20539; Mature: 20539
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFGRSAVRNVLAWIGGCAIVAVVVGGALVCGAKAWLREEPRLAQADVIVVLGGESGQRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCCEE IGAAELYHAGVAPRVFVSGQGDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTL EHHHHHHHCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH AGQQVQSAILVTSWYHTGRALAVFRKVWPEVTWGAQGVFPGDTLAKSVPIYEAGSILAEY HHHHHHHHHHEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHH VKRAWYAVRYRA HHHHHHHHEECC >Mature Secondary Structure MVFGRSAVRNVLAWIGGCAIVAVVVGGALVCGAKAWLREEPRLAQADVIVVLGGESGQRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCCEE IGAAELYHAGVAPRVFVSGQGDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTL EHHHHHHHCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH AGQQVQSAILVTSWYHTGRALAVFRKVWPEVTWGAQGVFPGDTLAKSVPIYEAGSILAEY HHHHHHHHHHEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHH VKRAWYAVRYRA HHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA