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The map label for this gene is pld [H]

Identifier: 187929790

GI number: 187929790

Start: 2834217

End: 2834801

Strand: Reverse

Name: pld [H]

Synonym: Rpic_2720

Alternate gene names: 187929790

Gene position: 2834801-2834217 (Counterclockwise)

Preceding gene: 187929791

Following gene: 187929789

Centisome position: 71.9

GC content: 66.67

Gene sequence:

>585_bases
ATGATGGTGCGCCGCTTGGGGTGGCTGCTGGCCGCATGGCTGGCGTTTGCTGCAGGTGGTGTCGCACTGGCCCGCAGCGC
GCCGCCGGTGCAGCCGGCCAAGGGCACGGTGCAGGCAGCGTTTACGCCGGATGACGACATCGAAGGGTTGTTGGCCGATG
CCATTGACCAGGCGCGCGAGCAGGTGCTGGTGCAGGCGTATCTGCTGTCGAACAAGGCGATTACGCGTGCGCTGCTGGCG
GCGCATCAGCGTGGCGTTGATGTGCGCGTGCTGGCCGATCGCGAGCAGATGACGCGCTCCGGCGGCAGCCGCGTGCCCGA
GGTCGCCAATGCGGGCATCCCAGTCTGGCTGGAGGTGCGCTATAAAAATGCGCACAACAAGGTCATCGTGATCGACCCGC
GCGGCGCGCATCCGGTGCTGGTCACCGGCAGCTTCAATTTCACGCAGACCGCGCAGCGCGGCAATGCCGAGAACGTACTG
ATCGTGCGCGGCGACGCCGATCTCGCCCAGCGCTATGCCGCCAACTGGCAGAAGCATGCGGGTGACGCGTTGCCCTATCG
AGCCCAACAACCGGCCGCCCAATGA

Upstream 100 bases:

>100_bases
CCGCGCAGAAGATCGCGCTGGAAATGGGGCCTTACCTGGAGCTGTATCCACACACACATCAGACCGACGGCTTCTTCGCG
GCCGTGCTGGAGCGCCGCGC

Downstream 100 bases:

>100_bases
ACGGATTGCCGCTGAACCTGAACCACATCGCGCTGGGCCACATGATCGACGACATTGTCTTCGATCTGGGTGGCCCTCGC
TTTATCTGGCAGCTGGGTGT

Product: putative endonuclease protein

Products: NA

Alternate protein names: PLD; Choline phosphatase [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MMVRRLGWLLAAWLAFAAGGVALARSAPPVQPAKGTVQAAFTPDDDIEGLLADAIDQAREQVLVQAYLLSNKAITRALLA
AHQRGVDVRVLADREQMTRSGGSRVPEVANAGIPVWLEVRYKNAHNKVIVIDPRGAHPVLVTGSFNFTQTAQRGNAENVL
IVRGDADLAQRYAANWQKHAGDALPYRAQQPAAQ

Sequences:

>Translated_194_residues
MMVRRLGWLLAAWLAFAAGGVALARSAPPVQPAKGTVQAAFTPDDDIEGLLADAIDQAREQVLVQAYLLSNKAITRALLA
AHQRGVDVRVLADREQMTRSGGSRVPEVANAGIPVWLEVRYKNAHNKVIVIDPRGAHPVLVTGSFNFTQTAQRGNAENVL
IVRGDADLAQRYAANWQKHAGDALPYRAQQPAAQ
>Mature_194_residues
MMVRRLGWLLAAWLAFAAGGVALARSAPPVQPAKGTVQAAFTPDDDIEGLLADAIDQAREQVLVQAYLLSNKAITRALLA
AHQRGVDVRVLADREQMTRSGGSRVPEVANAGIPVWLEVRYKNAHNKVIVIDPRGAHPVLVTGSFNFTQTAQRGNAENVL
IVRGDADLAQRYAANWQKHAGDALPYRAQQPAAQ

Specific function: Could be a virulence factor [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 20947; Mature: 20947

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVRRLGWLLAAWLAFAAGGVALARSAPPVQPAKGTVQAAFTPDDDIEGLLADAIDQARE
CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
QVLVQAYLLSNKAITRALLAAHQRGVDVRVLADREQMTRSGGSRVPEVANAGIPVWLEVR
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHCCCCCEEEEEE
YKNAHNKVIVIDPRGAHPVLVTGSFNFTQTAQRGNAENVLIVRGDADLAQRYAANWQKHA
EECCCCEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
GDALPYRAQQPAAQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MMVRRLGWLLAAWLAFAAGGVALARSAPPVQPAKGTVQAAFTPDDDIEGLLADAIDQARE
CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
QVLVQAYLLSNKAITRALLAAHQRGVDVRVLADREQMTRSGGSRVPEVANAGIPVWLEVR
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHCCCCCEEEEEE
YKNAHNKVIVIDPRGAHPVLVTGSFNFTQTAQRGNAENVLIVRGDADLAQRYAANWQKHA
EECCCCEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
GDALPYRAQQPAAQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA