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The map label for this gene is 187929788

Identifier: 187929788

GI number: 187929788

Start: 2831283

End: 2832473

Strand: Reverse

Name: 187929788

Synonym: Rpic_2718

Alternate gene names: NA

Gene position: 2832473-2831283 (Counterclockwise)

Preceding gene: 187929789

Following gene: 187929787

Centisome position: 71.84

GC content: 60.96

Gene sequence:

>1191_bases
TTGATCGACTCCTTTCTGACTTTCCTTGCCAACGGCACCCTGGATTGGGCCTGGTGGCAGATCCTGATTTTCACGCTGGT
GATGACGCACATCACGATCGCCAGCGTCACGATTTTTCTGCACCGCTGCCAGGCGCACCGTGCGCTGGACGTGCATCCCA
TCGCCGGACACTTCTTCCGTTTCTGGCTGTGGCTAACCACGGGCATGGTCACCAAGGAATGGACCGCCATTCACCGTAAG
CACCACGCCAAGTGCGAAACCGAAGAGGATCCGCACAGCCCGCAGACCCGAGGCATCCGCAAGGTGCTGATGGAAGGCGC
GGAGCTGTATCGCGCTGAGGCCAAGAACAAGGAAACGATCCAGAAGTTCGGCCACGGTACGCCAGACGATTGGGTCGAGA
AGAACGTGTATTCGAAGTTCACGTGGCAGGGCGTCGGTTTGATGCTGATCCTGGACGTGCTGATGTTCGGCGCGCTGGGC
CTCACGGTGTGGGCGGTGCAGATGCTGTGGATTCCGATCCACGCTGCCGGCATCATCAATGGTTTGGGCCACTTCTGGGG
CTACCGCAACTTCGACTGCGAAGACGCTTCGACCAACGTGTCGCCGTGGGGCATCATCATCGGCGGCGAAGAACTGCACA
ACAACCACCACACGTACGCTACGTCGGCCAAGTTTTCGGTCAAGTGGTACGAGTTCGATATCGGCTGGGGCTACATCCGC
GCGCTGGAAATCGTCGGTTTGGCGAAAGTCAAGAAAGTGGCGCCCAAGGCCCGTTTTGGCGACGTGAAGCCGGTCGACCA
GAACACGCTGGAAGCCATCATCGCCAACCGCTACGACGTGATGGCCCGCTACGCGAAGACCGTCAAGGCGGCCTACCGCC
AGGAGCTGGCCAAGCTGAAGGACTCGCGCGCTGTCGAGTACCGCGCACTCAAGCCGGCCCGCAAGTGGTTCCACCGCGAC
GAGACGAAACTGGGCGCGCCGCAGCGCGAGCAGCTCTCCCAAATCGTGTCGGACCATTCGGCGCTGCACACCTTCGTTGA
GATGCGCCGTGAGCTTGGCGCCCTGTGGGGCCGATCGAACGCCACGCGTGAGCAACTGCTGTATCAGCTGCAAGAGTGGT
GCAAGCGTGCTGAGGAAAGCGGTATCCACGCGCTGCAGGAATTTGCTGTGCGCCTGCGCCGTTACGCCTGA

Upstream 100 bases:

>100_bases
TAACGCTGCGACAGTGGATGGCCTTAAGAGGCAGCAACGTCCGGATCGATTGATGGACCAAAGGCTGCTTTGATCACCCG
AGTTGACCACGGAGAACACT

Downstream 100 bases:

>100_bases
GTTTCTTGTTTCATAGGTGAAGCCCCGCTCCGCAGCGGGGCTTTTCTTTTGGGTAAACTGCCACAACTTACATTTTTAGC
AAGCCGCGACAATGTATCGC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Fatty Acid Desaturase Family Proteiin

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MIDSFLTFLANGTLDWAWWQILIFTLVMTHITIASVTIFLHRCQAHRALDVHPIAGHFFRFWLWLTTGMVTKEWTAIHRK
HHAKCETEEDPHSPQTRGIRKVLMEGAELYRAEAKNKETIQKFGHGTPDDWVEKNVYSKFTWQGVGLMLILDVLMFGALG
LTVWAVQMLWIPIHAAGIINGLGHFWGYRNFDCEDASTNVSPWGIIIGGEELHNNHHTYATSAKFSVKWYEFDIGWGYIR
ALEIVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKAAYRQELAKLKDSRAVEYRALKPARKWFHRD
ETKLGAPQREQLSQIVSDHSALHTFVEMRRELGALWGRSNATREQLLYQLQEWCKRAEESGIHALQEFAVRLRRYA

Sequences:

>Translated_396_residues
MIDSFLTFLANGTLDWAWWQILIFTLVMTHITIASVTIFLHRCQAHRALDVHPIAGHFFRFWLWLTTGMVTKEWTAIHRK
HHAKCETEEDPHSPQTRGIRKVLMEGAELYRAEAKNKETIQKFGHGTPDDWVEKNVYSKFTWQGVGLMLILDVLMFGALG
LTVWAVQMLWIPIHAAGIINGLGHFWGYRNFDCEDASTNVSPWGIIIGGEELHNNHHTYATSAKFSVKWYEFDIGWGYIR
ALEIVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKAAYRQELAKLKDSRAVEYRALKPARKWFHRD
ETKLGAPQREQLSQIVSDHSALHTFVEMRRELGALWGRSNATREQLLYQLQEWCKRAEESGIHALQEFAVRLRRYA
>Mature_396_residues
MIDSFLTFLANGTLDWAWWQILIFTLVMTHITIASVTIFLHRCQAHRALDVHPIAGHFFRFWLWLTTGMVTKEWTAIHRK
HHAKCETEEDPHSPQTRGIRKVLMEGAELYRAEAKNKETIQKFGHGTPDDWVEKNVYSKFTWQGVGLMLILDVLMFGALG
LTVWAVQMLWIPIHAAGIINGLGHFWGYRNFDCEDASTNVSPWGIIIGGEELHNNHHTYATSAKFSVKWYEFDIGWGYIR
ALEIVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKAAYRQELAKLKDSRAVEYRALKPARKWFHRD
ETKLGAPQREQLSQIVSDHSALHTFVEMRRELGALWGRSNATREQLLYQLQEWCKRAEESGIHALQEFAVRLRRYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321383, Length=265, Percent_Identity=24.1509433962264, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45728; Mature: 45728

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSFLTFLANGTLDWAWWQILIFTLVMTHITIASVTIFLHRCQAHRALDVHPIAGHFFR
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FWLWLTTGMVTKEWTAIHRKHHAKCETEEDPHSPQTRGIRKVLMEGAELYRAEAKNKETI
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
QKFGHGTPDDWVEKNVYSKFTWQGVGLMLILDVLMFGALGLTVWAVQMLWIPIHAAGIIN
HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGHFWGYRNFDCEDASTNVSPWGIIIGGEELHNNHHTYATSAKFSVKWYEFDIGWGYIR
HHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEEECCEEEEEEEEEECCHHHHH
ALEIVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKAAYRQELAKLK
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSRAVEYRALKPARKWFHRDETKLGAPQREQLSQIVSDHSALHTFVEMRRELGALWGRSN
HCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATREQLLYQLQEWCKRAEESGIHALQEFAVRLRRYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDSFLTFLANGTLDWAWWQILIFTLVMTHITIASVTIFLHRCQAHRALDVHPIAGHFFR
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FWLWLTTGMVTKEWTAIHRKHHAKCETEEDPHSPQTRGIRKVLMEGAELYRAEAKNKETI
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
QKFGHGTPDDWVEKNVYSKFTWQGVGLMLILDVLMFGALGLTVWAVQMLWIPIHAAGIIN
HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGHFWGYRNFDCEDASTNVSPWGIIIGGEELHNNHHTYATSAKFSVKWYEFDIGWGYIR
HHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEEECCEEEEEEEEEECCHHHHH
ALEIVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKAAYRQELAKLK
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSRAVEYRALKPARKWFHRDETKLGAPQREQLSQIVSDHSALHTFVEMRRELGALWGRSN
HCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATREQLLYQLQEWCKRAEESGIHALQEFAVRLRRYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA