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The map label for this gene is 187929688

Identifier: 187929688

GI number: 187929688

Start: 2731902

End: 2732195

Strand: Reverse

Name: 187929688

Synonym: Rpic_2616

Alternate gene names: NA

Gene position: 2732195-2731902 (Counterclockwise)

Preceding gene: 187929698

Following gene: 187929682

Centisome position: 69.3

GC content: 59.86

Gene sequence:

>294_bases
TTGGCAGCGAAACATACATTGTCGGAGGCACTAAAGACCATCAGGAAAGCGCGTGGATTGAGCCAGGAGGCGTTCTCCGA
CGTGTCCAGCCGCACCTACATGAGTACGCTGGAGCGCGACCTCAAAAGTCCGACCCTGAACAAGCTCGCCGAGCTGTGCG
AGGTCATGGAGATCCACCCGCTCACGCTGCTGACGCTGGCCTATGCCGGCGACGACCTGCAGCAGGTCGATCAACTGCTG
GCGCAGGTGCGCCAGCAGTTGGAGACTGTGACGAAGAAGAGTGACACGCCATAG

Upstream 100 bases:

>100_bases
TAAAAGCACAAAAGCGGTAGGTTTACATGAATGAACACTATAGGTTGTAGTCCTATAGGGCGCAATCGACTGTCATCTTG
GATTTTGGGGAGATCCAAGG

Downstream 100 bases:

>100_bases
CGTGCGACGTCGCTGGCGTGGCCGATCCGGCGCCGCCGGTTCGGGGACTGCAGGGGCGCCAAGCATCGCGCGGCGGGGAT
AGGCCGCAGGGCTTTCCCCG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; PbsX Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PbsX Family; Helix-Turn-Helix Domain-Containing

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAAKHTLSEALKTIRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLNKLAELCEVMEIHPLTLLTLAYAGDDLQQVDQLL
AQVRQQLETVTKKSDTP

Sequences:

>Translated_97_residues
MAAKHTLSEALKTIRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLNKLAELCEVMEIHPLTLLTLAYAGDDLQQVDQLL
AQVRQQLETVTKKSDTP
>Mature_96_residues
AAKHTLSEALKTIRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLNKLAELCEVMEIHPLTLLTLAYAGDDLQQVDQLLA
QVRQQLETVTKKSDTP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10832; Mature: 10700

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKHTLSEALKTIRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLNKLAELCEVMEIHP
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LTLLTLAYAGDDLQQVDQLLAQVRQQLETVTKKSDTP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAKHTLSEALKTIRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLNKLAELCEVMEIHP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LTLLTLAYAGDDLQQVDQLLAQVRQQLETVTKKSDTP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA