| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929676
Identifier: 187929676
GI number: 187929676
Start: 2718555
End: 2719457
Strand: Reverse
Name: 187929676
Synonym: Rpic_2604
Alternate gene names: NA
Gene position: 2719457-2718555 (Counterclockwise)
Preceding gene: 187929682
Following gene: 187929675
Centisome position: 68.98
GC content: 56.7
Gene sequence:
>903_bases ATGCAAAAACCTTCCTTTCCTGCCGCCGAACCTGCTGAGCCTAAGGGGCTAAGTTGGGGGCTGGAGAGCAGACTTCAATT CATCGATTTCCGTCTGCGCTGGGAGCGGCGCATCAACCGGATGGATCTCACCGAGCACTTTGGTATTTCGGTCCCGCAGG CATCGCTGGACATTTCCAAGTACATGGAGTTGGCGCCGAGCAACCTGACTTACGACCGCAGCTCCAAGACCTACACGGCA GCGCAGAGTTTTCACCCGCTTTACCAACGAAGCTCGGCGCAACGCTATCTAGCAGAACTGCTAGCGACAAAGATGGGAAT TGTCGAGCCGACGGCCAGCTTCATCGGCTCCGCGCCGGAGACAGATTGGGCCCCGTCCCCTTGGCGCACGATCAATGAGC AGACCGTCGAAGCAGTGGTGCGCGCAATCCGCCAGCAGGAATCCATTCTGGTGAGCTACCAGTCCATGACGTCGTTGGAT GAATCGGTTCGCTTGCTGTCTCCCCACGCCCTTGGCAATGACGGTTTTCGCTGGCACATGCGCGCGTTTTGCCACAAGCG CCAGCGCTTCAGCGATTTCGTCCTTGCTCGAATCCTGCGCATCGATGGCTTCGAGGCGACCCAAGTGGACTCCAACCAAG ATTCGCATTGGCAAACTGTATTGACGCTGGTACTTGCACCGCATCCCGATTTGCCTGCAGCCAAGAAACGAGTCTTAGAG TTGGACTACGGCATGGAAGATGGAGAGGTCAAACTTCCATGCCGCCAAGCGTTTCTGTACTACACGCTGAGACGTTTGGG TTTGCATACCAAGGAAGCACCAGACCCCCTCGCACAGCAGATCACGCTGAAAAACCGCGATGAAATCCAACCCTATATCG ACGCCTTGGCGGCACAGGCCTGA
Upstream 100 bases:
>100_bases GTTGTAGGCACTGGGGTCTCCGGGTAGACGACCGAAGGATGATCGCGTATAGTTAATGTACGACGATTTTTTATATCCGT CTACTTTTTAGGCGTGACTG
Downstream 100 bases:
>100_bases CTTCACATGACAACAATTTTTGAACTGGTCAAAGACCCCTACGAGCGCAAGGCACGTGTTATCCCTGGCCTTCTTGTGGC CTTACCCGTGCTGGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQKPSFPAAEPAEPKGLSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISKYMELAPSNLTYDRSSKTYTA AQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPETDWAPSPWRTINEQTVEAVVRAIRQQESILVSYQSMTSLD ESVRLLSPHALGNDGFRWHMRAFCHKRQRFSDFVLARILRIDGFEATQVDSNQDSHWQTVLTLVLAPHPDLPAAKKRVLE LDYGMEDGEVKLPCRQAFLYYTLRRLGLHTKEAPDPLAQQITLKNRDEIQPYIDALAAQA
Sequences:
>Translated_300_residues MQKPSFPAAEPAEPKGLSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISKYMELAPSNLTYDRSSKTYTA AQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPETDWAPSPWRTINEQTVEAVVRAIRQQESILVSYQSMTSLD ESVRLLSPHALGNDGFRWHMRAFCHKRQRFSDFVLARILRIDGFEATQVDSNQDSHWQTVLTLVLAPHPDLPAAKKRVLE LDYGMEDGEVKLPCRQAFLYYTLRRLGLHTKEAPDPLAQQITLKNRDEIQPYIDALAAQA >Mature_300_residues MQKPSFPAAEPAEPKGLSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISKYMELAPSNLTYDRSSKTYTA AQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPETDWAPSPWRTINEQTVEAVVRAIRQQESILVSYQSMTSLD ESVRLLSPHALGNDGFRWHMRAFCHKRQRFSDFVLARILRIDGFEATQVDSNQDSHWQTVLTLVLAPHPDLPAAKKRVLE LDYGMEDGEVKLPCRQAFLYYTLRRLGLHTKEAPDPLAQQITLKNRDEIQPYIDALAAQA
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34291; Mature: 34291
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPSFPAAEPAEPKGLSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCHHHHCCCCCCCHHHHHHH YMELAPSNLTYDRSSKTYTAAQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC TDWAPSPWRTINEQTVEAVVRAIRQQESILVSYQSMTSLDESVRLLSPHALGNDGFRWHM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RAFCHKRQRFSDFVLARILRIDGFEATQVDSNQDSHWQTVLTLVLAPHPDLPAAKKRVLE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LDYGMEDGEVKLPCRQAFLYYTLRRLGLHTKEAPDPLAQQITLKNRDEIQPYIDALAAQA HCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQKPSFPAAEPAEPKGLSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCHHHHCCCCCCCHHHHHHH YMELAPSNLTYDRSSKTYTAAQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC TDWAPSPWRTINEQTVEAVVRAIRQQESILVSYQSMTSLDESVRLLSPHALGNDGFRWHM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RAFCHKRQRFSDFVLARILRIDGFEATQVDSNQDSHWQTVLTLVLAPHPDLPAAKKRVLE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LDYGMEDGEVKLPCRQAFLYYTLRRLGLHTKEAPDPLAQQITLKNRDEIQPYIDALAAQA HCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA