| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187929663
Identifier: 187929663
GI number: 187929663
Start: 2701617
End: 2702156
Strand: Reverse
Name: 187929663
Synonym: Rpic_2591
Alternate gene names: NA
Gene position: 2702156-2701617 (Counterclockwise)
Preceding gene: 187929664
Following gene: 187929662
Centisome position: 68.54
GC content: 67.96
Gene sequence:
>540_bases ATGGATGCCAGCGAACCGTTGTCCAACGATCGTCAGACGGAGCGCCCCTCCGTAAAGGTGGCAGTGGTGCTGTGTCGCCG CCCGACGGCCAACCGCTGGCAGCCGTTCCAGTGGCGGCTTGAGGCTGTCGTGCCCGACCTGGGCGAATACGGCACCGCAC CGCGCTGCCTCGATCGCGCTGAGGATGAGAAGGGCGAAGAGCGCTGGCTCACGCCCGGCTTCTCCGTCACGCTGTTTCGC GACGAGGCCGAGGGCTACTACCTGAACGTGACCTCCGCCGCGCCCTGCTGGTTCGTGCTGTGGCGCCTGGGCGAGTCGGG CACGACCGACGAGGGCCGGGCGATTCCGCATACGGTTTCGCTGAGCTACAACGAGGCTGGTCGCTGGCTCGACGGCGGCG AGACGGTCGAAAACGTGCCGTTGGATGCCGCTGCGCTGGAGTGGCTGCAGGCGTACGTGGCCGAAAACTACCGGCCCGAG CCGAAGAAGCGGCGCCGCCCGGAGTCGTTCCTGCCGCCGGAAGACCGCGCGAAGTTCTGA
Upstream 100 bases:
>100_bases CAGATCGCGCGCCGCGTCGCCATTGCCGTGGCCGAGAAGGCGAAGGACATGACGAGCAAGTTCCCGTCAATCGTCGTGCA GAACACCTGAGCGCCAAGCC
Downstream 100 bases:
>100_bases GCGAGACTGCTGTGAGCGACGAAACCTTCCTCTCGCGCTGGTCGCGCCGCAAGGCCGCCGAACGGCGGGGCGAGCCCGAA CCGGAAGCGGCATCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDASEPLSNDRQTERPSVKVAVVLCRRPTANRWQPFQWRLEAVVPDLGEYGTAPRCLDRAEDEKGEERWLTPGFSVTLFR DEAEGYYLNVTSAAPCWFVLWRLGESGTTDEGRAIPHTVSLSYNEAGRWLDGGETVENVPLDAAALEWLQAYVAENYRPE PKKRRRPESFLPPEDRAKF
Sequences:
>Translated_179_residues MDASEPLSNDRQTERPSVKVAVVLCRRPTANRWQPFQWRLEAVVPDLGEYGTAPRCLDRAEDEKGEERWLTPGFSVTLFR DEAEGYYLNVTSAAPCWFVLWRLGESGTTDEGRAIPHTVSLSYNEAGRWLDGGETVENVPLDAAALEWLQAYVAENYRPE PKKRRRPESFLPPEDRAKF >Mature_179_residues MDASEPLSNDRQTERPSVKVAVVLCRRPTANRWQPFQWRLEAVVPDLGEYGTAPRCLDRAEDEKGEERWLTPGFSVTLFR DEAEGYYLNVTSAAPCWFVLWRLGESGTTDEGRAIPHTVSLSYNEAGRWLDGGETVENVPLDAAALEWLQAYVAENYRPE PKKRRRPESFLPPEDRAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20444; Mature: 20444
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASEPLSNDRQTERPSVKVAVVLCRRPTANRWQPFQWRLEAVVPDLGEYGTAPRCLDRA CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHEEHHHHCCCCHHCCCCCHHHHHH EDEKGEERWLTPGFSVTLFRDEAEGYYLNVTSAAPCWFVLWRLGESGTTDEGRAIPHTVS CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE LSYNEAGRWLDGGETVENVPLDAAALEWLQAYVAENYRPEPKKRRRPESFLPPEDRAKF ECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDASEPLSNDRQTERPSVKVAVVLCRRPTANRWQPFQWRLEAVVPDLGEYGTAPRCLDRA CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHEEHHHHCCCCHHCCCCCHHHHHH EDEKGEERWLTPGFSVTLFRDEAEGYYLNVTSAAPCWFVLWRLGESGTTDEGRAIPHTVS CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE LSYNEAGRWLDGGETVENVPLDAAALEWLQAYVAENYRPEPKKRRRPESFLPPEDRAKF ECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA