| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187929550
Identifier: 187929550
GI number: 187929550
Start: 2581909
End: 2583384
Strand: Reverse
Name: 187929550
Synonym: Rpic_2471
Alternate gene names: NA
Gene position: 2583384-2581909 (Counterclockwise)
Preceding gene: 187929551
Following gene: 187929549
Centisome position: 65.53
GC content: 68.09
Gene sequence:
>1476_bases ATGAAGACCGAGTCGACAGGTTCCGCCCAATCGGCCGGCCGCGCCGCCGCCGATGCGCGCGCCCAGGGTGGGCGAACCGA GCGCCGGCGCAACGCGCAAGGCATTGGCGCGTCGACCGGGTATGGGCGCCTGATTGCGCCCGCCGTGTCCAGCCCGAGCG CTGCGCTCGAAACGCTGGGCGCGGTGGTGGCGGCTATCGGCATCGTCTGGCTGTTCGCGCCGGACAATCCGCTGCTGCTC GGTTACGGTTTTCCGTGGATCTGGCTGGTGCCGCTCATCCTGGCGCTGCGCTACGGCACGCTGCTCGGCGCGCTGGCCGC GCTGGTGGTGTTGGGCGCCTGGGCCGTGTTTTACGGACAGACGGCCGCCGCCGGCAGCTTCCCGCGCATGTACTTCCTGG GCGGCCTGATGCTGGTGTTGATTGGCGGGCAGTACGGCGACATATGGGGCGCGCGGTTGTCGCGTGCCCGCACCGTCAAT GGTTATCTGAACGACCGGCTGGCAGCGCTCACCAAGAACCACTTCCTGCTGCGCCTCTCGCACGAGCGCCTGGAGAACGA TCTGCTGGCCAAGCCGACCACGCTGCGCGACACGCTCACGCAGCTGCGCAATATTGCGCTGGCTGCGCGCGAGCACGGCA CAGCCGAGAACGCGCCTGACGTGGCGCAACTGCCTGGCGCCGAGCCGTTCCTGCAATGGACGGCGCAGGCCTGCCAGCTG GAAGTGGCGGCCATGGTGCGCGTGACGGGCAACCGCATCGACACCGAACCGGTGGCCCGCGTCGGCACGCCGTTCGACAT CGTTGCCGATGATCCGTTGATCCGCCATTGCATCGACACCCACACGCTCGGTCACCCGCAGGCGCCCGAGCTGCGGAATG TGAACAACCCCGAAGAGAGCTCGCGCTACGTGGCGTGCGCGCCCGTGCTGTCGGGTGCGGACGAGCTGATCGGCCTGGTC GTCGTGCACCAGATGCCGTTCCTCTCGCTGTCGTACGAGAACCTGCAGTTCCTGCTGGTGCTGCTTGGCTACTACGCCGA CGGCGTGCGCCATCTCACCGTCAGCTCCGAGATTCTGGATCTCGTGCCCGACGCGCCGTACGAGTTTGCGCTCGACCTCG GCCGGCTGGCGCGCCTGCATCGCGATACCGGCATCGATTCGTCGGTGGTGGCGCTCATCTTTGACCAGGAAGAGGCCAGC GATGCGCTGTTCGAGAGCGTGGTGCGCAGCCGCCGCGCGCTGGACGTCGTCTGGCAGGCGAGCGGCAAGGGCCGCCGCGC CATCATCACGCTGATGCCGCTGTCGGGCGCGGGTGCCGTGTCGGCCTATCTGGTGCGCATTGAAGACAGCCTGCGTGCGC AGTTCGGCGTCGATTTCGAGGGCGGGCACATCAGCGTGCAGACGTTGCATGTGACCGGCGAGCATCCGGGCGAAGCGCTG CAGCGCTTCCTCTCGCGCTGCCATCTCGATGCATAG
Upstream 100 bases:
>100_bases GGAGCGCGGCCGGCAGCCGCACCGGCTGGAGCCGCGATGCCGTGTCGGCAGTGGCGCAGAAGCTGCTGCGCGAACTGCTC TCGCCGCTGGGCCGGGGCTG
Downstream 100 bases:
>100_bases GGGCGCATAGGCATGCGGATCGACCATGTTTAAGCTCACGCTCGGCGGCATCTCGGCCCAGATTGCGGCAGTGGCGATGG CGCTGCATGCCGGCAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Transporter Component Transmembrane Protein
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKTESTGSAQSAGRAAADARAQGGRTERRRNAQGIGASTGYGRLIAPAVSSPSAALETLGAVVAAIGIVWLFAPDNPLLL GYGFPWIWLVPLILALRYGTLLGALAALVVLGAWAVFYGQTAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVN GYLNDRLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPGAEPFLQWTAQACQL EVAAMVRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGHPQAPELRNVNNPEESSRYVACAPVLSGADELIGLV VVHQMPFLSLSYENLQFLLVLLGYYADGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEAS DALFESVVRSRRALDVVWQASGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHISVQTLHVTGEHPGEAL QRFLSRCHLDA
Sequences:
>Translated_491_residues MKTESTGSAQSAGRAAADARAQGGRTERRRNAQGIGASTGYGRLIAPAVSSPSAALETLGAVVAAIGIVWLFAPDNPLLL GYGFPWIWLVPLILALRYGTLLGALAALVVLGAWAVFYGQTAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVN GYLNDRLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPGAEPFLQWTAQACQL EVAAMVRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGHPQAPELRNVNNPEESSRYVACAPVLSGADELIGLV VVHQMPFLSLSYENLQFLLVLLGYYADGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEAS DALFESVVRSRRALDVVWQASGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHISVQTLHVTGEHPGEAL QRFLSRCHLDA >Mature_491_residues MKTESTGSAQSAGRAAADARAQGGRTERRRNAQGIGASTGYGRLIAPAVSSPSAALETLGAVVAAIGIVWLFAPDNPLLL GYGFPWIWLVPLILALRYGTLLGALAALVVLGAWAVFYGQTAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVN GYLNDRLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPGAEPFLQWTAQACQL EVAAMVRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGHPQAPELRNVNNPEESSRYVACAPVLSGADELIGLV VVHQMPFLSLSYENLQFLLVLLGYYADGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEAS DALFESVVRSRRALDVVWQASGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHISVQTLHVTGEHPGEAL QRFLSRCHLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52935; Mature: 52935
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTESTGSAQSAGRAAADARAQGGRTERRRNAQGIGASTGYGRLIAPAVSSPSAALETLG CCCCCCCCHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHH AVVAAIGIVWLFAPDNPLLLGYGFPWIWLVPLILALRYGTLLGALAALVVLGAWAVFYGQ HHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVNGYLNDRLAALTKNHFLLRLS HHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEE HERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPGAEPFLQWTAQACQL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHH EVAAMVRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGHPQAPELRNVNNPEES HHHHHEEECCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SRYVACAPVLSGADELIGLVVVHQMPFLSLSYENLQFLLVLLGYYADGVRHLTVSSEILD CCEEEEEHHHCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCEEEEEHHHHHH LVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEASDALFESVVRSRRALDVVWQA HCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEC SGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHISVQTLHVTGEHPGEAL CCCCCEEEEEEEECCCCCCHHHEEEEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHH QRFLSRCHLDA HHHHHHHCCCC >Mature Secondary Structure MKTESTGSAQSAGRAAADARAQGGRTERRRNAQGIGASTGYGRLIAPAVSSPSAALETLG CCCCCCCCHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHH AVVAAIGIVWLFAPDNPLLLGYGFPWIWLVPLILALRYGTLLGALAALVVLGAWAVFYGQ HHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVNGYLNDRLAALTKNHFLLRLS HHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEE HERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPGAEPFLQWTAQACQL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHH EVAAMVRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGHPQAPELRNVNNPEES HHHHHEEECCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SRYVACAPVLSGADELIGLVVVHQMPFLSLSYENLQFLLVLLGYYADGVRHLTVSSEILD CCEEEEEHHHCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCEEEEEHHHHHH LVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEASDALFESVVRSRRALDVVWQA HCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEC SGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHISVQTLHVTGEHPGEAL CCCCCEEEEEEEECCCCCCHHHEEEEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHH QRFLSRCHLDA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA