Click here to switch to the map view.

The map label for this gene is 187929522

Identifier: 187929522

GI number: 187929522

Start: 2553885

End: 2554841

Strand: Reverse

Name: 187929522

Synonym: Rpic_2443

Alternate gene names: NA

Gene position: 2554841-2553885 (Counterclockwise)

Preceding gene: 187929523

Following gene: 187929519

Centisome position: 64.8

GC content: 60.4

Gene sequence:

>957_bases
ATGAGCCTGCGCGCTTTGGTGGGTCTGACGGCGGCAACGATGCTGACAGGCCTGGGAATACAAACCGCCTCGGCGCAGGC
CACGCGCCCGAAGGCACCTATCTACGGCGTCACGGTTGATGACGTCAGCAACATCAACGCGATCGTGGCATCGCTTACGC
ACCTGCCGTACAAGCCTACCGTGCGCGTGGTCTTTGACCCGGGTACGACGGCTGCGCAGTACTACCCGGCACTCGTCAAG
CTTCATGCTGTCGCCTACGTGATGGGCGAGATCATGGACTCGTACTATTTCCCGAGCGATCTGCAGACGTACACCGACCG
TACCAATGAGCTGGTGGGCACGCTGAAGAACGTGGTGGACGTGTGGGAGATCGCTAACGAGATCAATGGGGAGTGGCTGC
GCACGGACCCGACCGGCCCGAATTCGGTGGCCGCGAGTGAGGAGCAGGACATCGGCAACATGGTGGCGGCGGCGCATGAC
ATCGTCAAAGCTGCGGGCGGCCTGACTGCTGTCACGATGTACTACAACGACGACGGCAAGGGCACCAACTGCTACGAGCT
GCCGATGGACTCGTGGCGTACCTGGGCACAGTCGTATCTGCCCGCACGTGTGCGCCAGGGTGCGGACTACGCACTGTTCA
GCTACTACCCTTACCAAGACTGCCCCGGTTTGAACCCGACGTGGGCAAACGATTTCAAGTTGCTCGAAAGCATCTTCCCG
GTCGCGAAGGTGGGTTTTGGTGAGATCGGTACGTCCAGCACTTCGGCTCCGGCCTCGGTGCAGCAGAACCTGCTCAAGTC
GTACTACCCGATGGGTACCACCACGATGGCAGCGGATCGGCGCTTCATCGGTGGTTACTTCTGGTGGAACTACGCTGAGC
AGATGCTGCCGTACAGCACCAGTTCATACTGGAGCCTGCTGAACAACACCATCAAGCCGCTGGCAGCTCCGCAATAA

Upstream 100 bases:

>100_bases
GGCGCTTGTCCATCGAAGTACTGGGCGTAACGTTTTGCGTCCGAGGGAATAGAAAACCACAATGTTGGAAACCAAAAAAG
CAGCACAGAGGGCGGCGCGC

Downstream 100 bases:

>100_bases
GAAGAGGCTGCAGCCTCTCCTTGCAAAAGGGTAGGACTCCGAGCCGGACGGACGAGACACGATCCGGCAACAAAAAACCC
GCGTCAGCTCATGCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSLRALVGLTAATMLTGLGIQTASAQATRPKAPIYGVTVDDVSNINAIVASLTHLPYKPTVRVVFDPGTTAAQYYPALVK
LHAVAYVMGEIMDSYYFPSDLQTYTDRTNELVGTLKNVVDVWEIANEINGEWLRTDPTGPNSVAASEEQDIGNMVAAAHD
IVKAAGGLTAVTMYYNDDGKGTNCYELPMDSWRTWAQSYLPARVRQGADYALFSYYPYQDCPGLNPTWANDFKLLESIFP
VAKVGFGEIGTSSTSAPASVQQNLLKSYYPMGTTTMAADRRFIGGYFWWNYAEQMLPYSTSSYWSLLNNTIKPLAAPQ

Sequences:

>Translated_318_residues
MSLRALVGLTAATMLTGLGIQTASAQATRPKAPIYGVTVDDVSNINAIVASLTHLPYKPTVRVVFDPGTTAAQYYPALVK
LHAVAYVMGEIMDSYYFPSDLQTYTDRTNELVGTLKNVVDVWEIANEINGEWLRTDPTGPNSVAASEEQDIGNMVAAAHD
IVKAAGGLTAVTMYYNDDGKGTNCYELPMDSWRTWAQSYLPARVRQGADYALFSYYPYQDCPGLNPTWANDFKLLESIFP
VAKVGFGEIGTSSTSAPASVQQNLLKSYYPMGTTTMAADRRFIGGYFWWNYAEQMLPYSTSSYWSLLNNTIKPLAAPQ
>Mature_317_residues
SLRALVGLTAATMLTGLGIQTASAQATRPKAPIYGVTVDDVSNINAIVASLTHLPYKPTVRVVFDPGTTAAQYYPALVKL
HAVAYVMGEIMDSYYFPSDLQTYTDRTNELVGTLKNVVDVWEIANEINGEWLRTDPTGPNSVAASEEQDIGNMVAAAHDI
VKAAGGLTAVTMYYNDDGKGTNCYELPMDSWRTWAQSYLPARVRQGADYALFSYYPYQDCPGLNPTWANDFKLLESIFPV
AKVGFGEIGTSSTSAPASVQQNLLKSYYPMGTTTMAADRRFIGGYFWWNYAEQMLPYSTSSYWSLLNNTIKPLAAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34898; Mature: 34766

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRALVGLTAATMLTGLGIQTASAQATRPKAPIYGVTVDDVSNINAIVASLTHLPYKPT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHCCCCCE
VRVVFDPGTTAAQYYPALVKLHAVAYVMGEIMDSYYFPSDLQTYTDRTNELVGTLKNVVD
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VWEIANEINGEWLRTDPTGPNSVAASEEQDIGNMVAAAHDIVKAAGGLTAVTMYYNDDGK
HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GTNCYELPMDSWRTWAQSYLPARVRQGADYALFSYYPYQDCPGLNPTWANDFKLLESIFP
CCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
VAKVGFGEIGTSSTSAPASVQQNLLKSYYPMGTTTMAADRRFIGGYFWWNYAEQMLPYST
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCC
SSYWSLLNNTIKPLAAPQ
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLRALVGLTAATMLTGLGIQTASAQATRPKAPIYGVTVDDVSNINAIVASLTHLPYKPT
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHCCCCCE
VRVVFDPGTTAAQYYPALVKLHAVAYVMGEIMDSYYFPSDLQTYTDRTNELVGTLKNVVD
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VWEIANEINGEWLRTDPTGPNSVAASEEQDIGNMVAAAHDIVKAAGGLTAVTMYYNDDGK
HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GTNCYELPMDSWRTWAQSYLPARVRQGADYALFSYYPYQDCPGLNPTWANDFKLLESIFP
CCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
VAKVGFGEIGTSSTSAPASVQQNLLKSYYPMGTTTMAADRRFIGGYFWWNYAEQMLPYST
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCC
SSYWSLLNNTIKPLAAPQ
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA