Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187929498

Identifier: 187929498

GI number: 187929498

Start: 2519802

End: 2521397

Strand: Reverse

Name: 187929498

Synonym: Rpic_2419

Alternate gene names: NA

Gene position: 2521397-2519802 (Counterclockwise)

Preceding gene: 187929499

Following gene: 187929497

Centisome position: 63.95

GC content: 62.97

Gene sequence:

>1596_bases
ATGGGTAGTCGACGTCATCTTTTTGTTGTCATGGCAACCAGTTGCATAGTTGCAATGCCGTTCATTGGCGGGTGCGGCGG
GGCAGACGACCCCGGCTCGTCGGATGTTGCGCAGTGTTCGGGGAGTTCTTGTCCGCCTAGCGGAGCGAACACCACGCCCA
GCACGCCAACCAGTCTGTGCCCGGCGGCGCTGGACTACACGACTACGTACACCGGCGGCTCGGGTAGCGGCGAGTACATC
AAGGTCAAGTTCGACACGAGCAAGAACACGTACCAGATGCAGTTCCTCGAGTCGTCGGTGCCGACCTCGGCGGGCCAGGT
CAATACGACGCGCAAGGGATTGATCATCGACGGTACGTTCGTGCATCCGGCCAACTTACCGACCCGCGAGCAGAACCGCT
GCGCTTTCGTGCTGCAGTCGGGCAAGACGGCGGACAACAGCTACGCGATCACCGTCAATCCGCAGGATCCGCCGATGCTG
TTTGTCGGTCAGGGCATCGTGGGGGGCGGCATCCCGGGGGCGACCATCCAGTTCGCAGGCATCCAGCCGATTCCGGGCGT
CGTGATTGGCGCAGTGCCGTCGCGAACGTTCGATTTCTATCCGTTCCTGGGCTTCTCCGAGACGGTGACGGATTTCTCGC
AGGTCGCGGGGCGCTACAACCAGGTCGGCGTGCATGTCACGCCCACGGGTTCGGGCAACCAAACCTCGGCGCCGCAAGGC
TGGCAGCCCGATGCCGTCAACTGGACGCAAACGTTAAAAGCGGACGGCTCGTGTACGGCCGAAGGGATCGACTATTCCTG
CCACACGACGGGCACGCCCTGGACGCTGCGTCAGAACACCGATGGCTCGCAGGACAACGTGTTTGTCAGCAACCCGACCA
GCAGCAACGTGCCGTATCCGTATGTCGGCCAGGTCTCACCGCTGGTGCTGCTGGCGCCGAGCCAGGCCAAGGGCATTCTG
ATTGCCGGCAAGCTCAACGGACAGGTCGTGCCGGTGGTGATCCGTGTTGGCTATTCGCACAGCGATCCGACAAACCTGCT
GGCTTCGGTGGCGGATGACCAGATCGGCATCTCGATCCTCTCGCCAGCAACGGCGATCCCGGCCAATGCGCTCAAGGGCG
GTTTCGTTGGGGCGACCAGCGGCTCGGCTTGCGGCGTGGTCACCAACAATGGCCCGAGTGGTGCGCCCGCCAGCGGCAAC
GGCTTGAACGCTACGGTTGATCACCCGGAACTGTCCGGCTCCTTTAGTGGGGGCTTCTTCCACGCCAATGCCGGCAACTG
CAGCGACGGGACGGCCGTGTCGACACTCGCCGCCAACTACACATCCACGTTGTTCCAGAACGGCACCGCGGCCTTCATCA
ACCCGCTCACATCGCGTGTGACAGCGCAGTTCGGGCTCGACTACACGCAAAGCGCGCCGGGCAAGCTGATCGTGACCGCG
CAGAACGACTTCAACGCGCAAGGCGCCAGCGGCAACGTCGCGTTGTTCAAGGCCGGCGACACCGGCGTGGCCGTCAAGGT
GGGCAACGTGTACGCGATGCTCATGAACAACAACAAGTACAACCCGTTCTTCACGGTCGGCGCATTTGTCCAGTGA

Upstream 100 bases:

>100_bases
CTGTCGGCTGTCGTTTGCCGACAGGCGGGGGTATTGACCGGCCGTTGCACACATTCGCCGGCCCACAACACAACAAGTTC
CAAAACATGAGGAGACAACC

Downstream 100 bases:

>100_bases
GGCGCGCATCAATGCAAGCACATCCGGTGGCGGCATGCGCAATGTGTGCGCCGCCACCTCTGAACAACAACATGGAGGAG
ACGCAAATGCAATGGCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYI
KVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPML
FVGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG
WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGIL
IAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGN
GLNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA
QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ

Sequences:

>Translated_531_residues
MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYI
KVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPML
FVGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG
WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGIL
IAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGN
GLNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA
QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ
>Mature_530_residues
GSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYIK
VKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLF
VGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQGW
QPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGILI
AGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNG
LNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTAQ
NDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54500; Mature: 54369

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLC
CCCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHC
PAALDYTTTYTGGSGSGEYIKVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTF
CHHHCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECEE
VHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLFVGQGIVGGGIPGATIQFAG
ECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEC
IQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG
CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCC
WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYP
CCCCCCCHHHEEECCCCEEECCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCC
YVGQVSPLVLLAPSQAKGILIAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISIL
CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEE
SPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNGLNATVDHPELSGSFSGGFF
CCCCCCCHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE
HANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA
ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEE
QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ
CCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure 
GSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLC
CCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHC
PAALDYTTTYTGGSGSGEYIKVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTF
CHHHCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECEE
VHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLFVGQGIVGGGIPGATIQFAG
ECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEC
IQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG
CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCC
WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYP
CCCCCCCHHHEEECCCCEEECCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCC
YVGQVSPLVLLAPSQAKGILIAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISIL
CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEE
SPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNGLNATVDHPELSGSFSGGFF
CCCCCCCHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE
HANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA
ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEE
QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ
CCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA