| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929478
Identifier: 187929478
GI number: 187929478
Start: 2493783
End: 2494625
Strand: Reverse
Name: 187929478
Synonym: Rpic_2399
Alternate gene names: NA
Gene position: 2494625-2493783 (Counterclockwise)
Preceding gene: 187929479
Following gene: 187929476
Centisome position: 63.27
GC content: 64.65
Gene sequence:
>843_bases ATGGCAAGCTCTGAGTCGCCGCGTCGCATCGCCCTCATCGTTACGACGTATAACCGCCCGGACGCGCTGGTTCGCGTACT GGCCGGCTGCAGCGCACAGACCGATCGCGCATTCGATGTCATCGTCGCCGACGACGGTTCGCGCGATGACACACGCTTTG CCATCGAAGCCGCCGCCAAGACCGCGCCGTATCCGCTGCGCCATGTCTGGCATCCCGACGACGGCTTCCGTGCCGGTGAG ATCCGCAACCGCGGCGTGCTGGCGACGGACGCCGACTACCTCGTTTTTCTCGATGGCGATTGCGTGCCGCGTCCGGATTT TGTGGCGCGGCACCGCGCATTGGCCGAGCGGGGGCGCCTGCTGTCCGGCAGCCGCATCCTGCTGAATGAGGCGATGACGC GCGAGGTCGTCGCCCAGCAGATCGACATCCACCTGAAGGATCGCGCGTATTGGTTTGCCGCCTGGCGCGCCGGCCGCGTC AACAAATTCGTGCCGCTATTGGTGCCGGGCTTACCGGTGCCGCGTACCCTCAAGGACACCAGCCTGCGCGGCATCAAGAG CTGCAACCTTGGCGTGTGGCGCAGCGATTTCGAGCGCGTGAACGGTTTCGATCAGAGCTTCGTCGGATGGGGCCATGAAG ACGCCGATCTGGCGGTTCGCCTTTATAACGCCGGCGTGCGGCGCAAGCGCGGTTTTTGCGCGACCGAAGTCTTCCACCTA TGGCATCGCGAGCAATCGCGCGAGCAGGAAAGCCCCAACTATCAACGCATGATGGCTCGGCGCAATACCGACATCATCCG CGCAGACGTCGGGCTTGCAGAACTGCGAGAGCAGGGCGCCTGA
Upstream 100 bases:
>100_bases CAGCGGGGTTTCCTCGATGGCGCCGAGGGCTTCATGCTGGCCGTGTCGAACGCCGAGGGCACGTATTACCGCTACGTCAA GCTGATGATGCTGCATCGTT
Downstream 100 bases:
>100_bases ACGAGCGCCGTCTGCTCACCAGGTCTTCTTCTGCTTAACGATGCCGAGAAACGGCCGCACGAAAATCTGATAGAGGAACT TGCGCACGAAGATCTGGCGC
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Lipooligosaccharide Biosynthesis Glycosyltransferase; Two-Domain Glycosyltransferase; Lipooligosaccharide Glycosyltransferase; Two-Domain Glucosyltransferase; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Gt2F; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGE IRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRV NKFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA
Sequences:
>Translated_280_residues MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGE IRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRV NKFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA >Mature_279_residues ASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGEI RNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVN KFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHLW HREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31685; Mature: 31554
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAK CCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHC TAPYPLRHVWHPDDGFRAGEIRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRL CCCCCHHEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCC LSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVNKFVPLLVPGLPVPRTLKDT CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC SLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL CCCCCCCCCCCCCHHHHHHHCCCCCHHCCCCCCCHHHEEEEECCCCHHCCCCHHHHHHHH WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA HHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHCCC >Mature Secondary Structure ASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAK CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHC TAPYPLRHVWHPDDGFRAGEIRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRL CCCCCHHEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCC LSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVNKFVPLLVPGLPVPRTLKDT CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC SLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL CCCCCCCCCCCCCHHHHHHHCCCCCHHCCCCCCCHHHEEEEECCCCHHCCCCHHHHHHHH WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA HHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA