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The map label for this gene is 187929416

Identifier: 187929416

GI number: 187929416

Start: 2440847

End: 2442232

Strand: Direct

Name: 187929416

Synonym: Rpic_2337

Alternate gene names: NA

Gene position: 2440847-2442232 (Clockwise)

Preceding gene: 187929415

Following gene: 187929417

Centisome position: 61.91

GC content: 60.03

Gene sequence:

>1386_bases
ATGAAGCTCAACACCGTCGCAGCTTCGACCCCTACGTACACGCATGAAGATGTTCTTGCCTCGCTGCACGTGAAGCCGAT
CGACCGGCTGCGCCGCACGGTGATGGCATGCCTTCTATGGGAATCGCAGTTCTACGAAAGCGGCGAGAGTATTGCCGACC
GCATCAAGAGCCTCGTTTCTCAATGCGACGTGCAGGAAGTCGCTGACCTGGCCATCAAGGCTCGCGAAGACATGAAGCTT
CGCCATGCGCCCCTTCTCCTGGTACGTGAGCTTGCACGTCATCAAGGCGCAGGCTCGATCGTCGGGCGCACCCTCACTCG
CGTCATTCAGCGCGCCGACGAGATCGGCGAGTTCCTGGCGATGTACTGGCAGGACGGCAGGTGCCCGGTGAGCAAGCAAG
TGAAGCTTGGCTTGGCCGGTGCATTCCGCAAGTTCGATGCTTATCAATTCGCCAAATACGACCGTGACACAACGGTAAAG
CTGCGCGACGCGCTGTTTCTATCGCACGCCAAGCCGCAGGACAACGATCGTCACTACACGCGTCATGAGCGTGCGACTGA
GCGTCGTCTCAATGCAACGCCGAAGCTGTCCCATGATGAGGCTCTGTATCGCCAGATCGCAGAACGCACGCTGCCGGTAC
CGGATACCTGGGAAGTTGCGCTGTCTGGCGGCGCGGATAAGCGCGAGACGTTTGAGCGGCTTCTGGCCGAGAACAAGCTC
GGCTACCTGGCGCTTCTGCGCAACCTGCGAAACATGGCAGATGCCGGCGTTCCTGCTGAGCTCGTCACTAAACATCTGAT
CGCTGGCGCTGCAAAGTCCAAGGCGCTCCCATTCCGCTTCGTGGCCGCAGCTCGTGCCGTTCCACAATGGGAACCGTTCG
TCGACGCCGCAATGCTGGAGGCAATGCATGGCATGCCGAAGCTGGCCGGCCGCACGAACCTCTTGGTCGATGTTTCCGGC
TCGATGGACTCGCGTCTATCGGAGAAGTCCGATCTCAACCGTATCGATGCTGCATCGGCCCTTGCTGTGCTTGTGCGTGG
TATCTGCCCCGAAGTGCGCGTCTTCACATTCTCCAACTCGGTTGTCGAGGTACCGCCGCGCGTGGGGATGTCGCTGATCG
ATGCAATTGCACGCTCTCAACCTCACAGCGGCACGTATCTCGGTCGAGCCGTCCAGGCAGTCAACAGCGCTGCACCTGGA
GCCGAACGCACCATCGTCATCACTGACGAGCAGTCGCACGATGTCGTCGGTGCACCAGGTGGCCGCGGCTACATGATCAA
CGTGGCCTCCTACCAGCACGGTGTTGGCTACGGCGCCTGGACGAAGATCGACGGTTTCAGTGAGTCGGTGGTGCGCTTTA
TTCAAGAAGTCGAGCAGGAGGTCTGA

Upstream 100 bases:

>100_bases
TTGCCCCATGAATTGATTTGCGTGGTGAAGGTTGCGGTTACTTCTTTCTGCGAATAACACCGCCACTGCTTGTTCCCGCA
TATAAAAAAGTGGAGAAGTC

Downstream 100 bases:

>100_bases
CATGAAGACCATCGAGATCAAAGGCTGGATCTTTGCTGAGCCGAACGAGTGGGACGGGACCCTTCAGTACAAATTCAGTT
CGATTGACTATGAGGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: TROVE Domain Protein; Ribonucleoprotein-Like; Trove Domain-Containing Protein; Ribonucleoprotein-Like Protein; Ribonucleoprotein-Related Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKLNTVAASTPTYTHEDVLASLHVKPIDRLRRTVMACLLWESQFYESGESIADRIKSLVSQCDVQEVADLAIKAREDMKL
RHAPLLLVRELARHQGAGSIVGRTLTRVIQRADEIGEFLAMYWQDGRCPVSKQVKLGLAGAFRKFDAYQFAKYDRDTTVK
LRDALFLSHAKPQDNDRHYTRHERATERRLNATPKLSHDEALYRQIAERTLPVPDTWEVALSGGADKRETFERLLAENKL
GYLALLRNLRNMADAGVPAELVTKHLIAGAAKSKALPFRFVAAARAVPQWEPFVDAAMLEAMHGMPKLAGRTNLLVDVSG
SMDSRLSEKSDLNRIDAASALAVLVRGICPEVRVFTFSNSVVEVPPRVGMSLIDAIARSQPHSGTYLGRAVQAVNSAAPG
AERTIVITDEQSHDVVGAPGGRGYMINVASYQHGVGYGAWTKIDGFSESVVRFIQEVEQEV

Sequences:

>Translated_461_residues
MKLNTVAASTPTYTHEDVLASLHVKPIDRLRRTVMACLLWESQFYESGESIADRIKSLVSQCDVQEVADLAIKAREDMKL
RHAPLLLVRELARHQGAGSIVGRTLTRVIQRADEIGEFLAMYWQDGRCPVSKQVKLGLAGAFRKFDAYQFAKYDRDTTVK
LRDALFLSHAKPQDNDRHYTRHERATERRLNATPKLSHDEALYRQIAERTLPVPDTWEVALSGGADKRETFERLLAENKL
GYLALLRNLRNMADAGVPAELVTKHLIAGAAKSKALPFRFVAAARAVPQWEPFVDAAMLEAMHGMPKLAGRTNLLVDVSG
SMDSRLSEKSDLNRIDAASALAVLVRGICPEVRVFTFSNSVVEVPPRVGMSLIDAIARSQPHSGTYLGRAVQAVNSAAPG
AERTIVITDEQSHDVVGAPGGRGYMINVASYQHGVGYGAWTKIDGFSESVVRFIQEVEQEV
>Mature_461_residues
MKLNTVAASTPTYTHEDVLASLHVKPIDRLRRTVMACLLWESQFYESGESIADRIKSLVSQCDVQEVADLAIKAREDMKL
RHAPLLLVRELARHQGAGSIVGRTLTRVIQRADEIGEFLAMYWQDGRCPVSKQVKLGLAGAFRKFDAYQFAKYDRDTTVK
LRDALFLSHAKPQDNDRHYTRHERATERRLNATPKLSHDEALYRQIAERTLPVPDTWEVALSGGADKRETFERLLAENKL
GYLALLRNLRNMADAGVPAELVTKHLIAGAAKSKALPFRFVAAARAVPQWEPFVDAAMLEAMHGMPKLAGRTNLLVDVSG
SMDSRLSEKSDLNRIDAASALAVLVRGICPEVRVFTFSNSVVEVPPRVGMSLIDAIARSQPHSGTYLGRAVQAVNSAAPG
AERTIVITDEQSHDVVGAPGGRGYMINVASYQHGVGYGAWTKIDGFSESVVRFIQEVEQEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50970; Mature: 50970

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50988 TROVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNTVAASTPTYTHEDVLASLHVKPIDRLRRTVMACLLWESQFYESGESIADRIKSLVS
CCCCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QCDVQEVADLAIKAREDMKLRHAPLLLVRELARHQGAGSIVGRTLTRVIQRADEIGEFLA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MYWQDGRCPVSKQVKLGLAGAFRKFDAYQFAKYDRDTTVKLRDALFLSHAKPQDNDRHYT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH
RHERATERRLNATPKLSHDEALYRQIAERTLPVPDTWEVALSGGADKRETFERLLAENKL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHCCC
GYLALLRNLRNMADAGVPAELVTKHLIAGAAKSKALPFRFVAAARAVPQWEPFVDAAMLE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AMHGMPKLAGRTNLLVDVSGSMDSRLSEKSDLNRIDAASALAVLVRGICPEVRVFTFSNS
HHCCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
VVEVPPRVGMSLIDAIARSQPHSGTYLGRAVQAVNSAAPGAERTIVITDEQSHDVVGAPG
EEECCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCC
GRGYMINVASYQHGVGYGAWTKIDGFSESVVRFIQEVEQEV
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLNTVAASTPTYTHEDVLASLHVKPIDRLRRTVMACLLWESQFYESGESIADRIKSLVS
CCCCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QCDVQEVADLAIKAREDMKLRHAPLLLVRELARHQGAGSIVGRTLTRVIQRADEIGEFLA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MYWQDGRCPVSKQVKLGLAGAFRKFDAYQFAKYDRDTTVKLRDALFLSHAKPQDNDRHYT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH
RHERATERRLNATPKLSHDEALYRQIAERTLPVPDTWEVALSGGADKRETFERLLAENKL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHCCC
GYLALLRNLRNMADAGVPAELVTKHLIAGAAKSKALPFRFVAAARAVPQWEPFVDAAMLE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AMHGMPKLAGRTNLLVDVSGSMDSRLSEKSDLNRIDAASALAVLVRGICPEVRVFTFSNS
HHCCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
VVEVPPRVGMSLIDAIARSQPHSGTYLGRAVQAVNSAAPGAERTIVITDEQSHDVVGAPG
EEECCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCC
GRGYMINVASYQHGVGYGAWTKIDGFSESVVRFIQEVEQEV
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA