| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929396
Identifier: 187929396
GI number: 187929396
Start: 2431070
End: 2431495
Strand: Reverse
Name: 187929396
Synonym: Rpic_2317
Alternate gene names: NA
Gene position: 2431495-2431070 (Counterclockwise)
Preceding gene: 187929397
Following gene: 187929395
Centisome position: 61.67
GC content: 58.69
Gene sequence:
>426_bases ATGAGTGCTCTGTACAAAGAGTTCACGCTTCGGTCGCCTGGCATCTGGCCGACAGTGCTTGCTTTCATCAAGGCCAACGC ACAGGCCTGCCTTGAGCGTGGGCATCCATTGCGCATCATTGTGACCGCTGAAGAGCGTCGGCGCACGTCAGAGGCCAACA AGTTCTATTGGGGCGTCGTGCTGCGCGACATCTCTGAACAAGCCTGGGTGCAGGGGAGACAGTTCGACACCAGCACCTGG CACGCCTATTTCGCAGAGCTCTACGGCGAGAAGGTGGAGATCACGCTCCCCGACGGCCGCATCCACGTGACGCGTCGCTC GACGTCTGACATGTCAGTTGGAGATTTCAGTGAGTACTTAGCCAAGGTGCAAGCGCATGCAGCCAACGAGTTCGGCGTCA CGTATGACGGCGAGGTGTACGCATGA
Upstream 100 bases:
>100_bases TCGTTAAAGCATCTGATGAGCCAGTTAATCTGGCCTCTGTGGATCTTGAGATCAGTGCGCAGCAGGTGGCCGAAGCGCTC ATCAAACGGGCGAAAGAAGC
Downstream 100 bases:
>100_bases CGTATCGATCTGAACCGTTGCGTCGCGCGGTGGCCAGTCTGCCGTGTGTGAATTGCGGACGGCATGGCGCTACTCAAGCT GCCCACTCGAATTTGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSALYKEFTLRSPGIWPTVLAFIKANAQACLERGHPLRIIVTAEERRRTSEANKFYWGVVLRDISEQAWVQGRQFDTSTW HAYFAELYGEKVEITLPDGRIHVTRRSTSDMSVGDFSEYLAKVQAHAANEFGVTYDGEVYA
Sequences:
>Translated_141_residues MSALYKEFTLRSPGIWPTVLAFIKANAQACLERGHPLRIIVTAEERRRTSEANKFYWGVVLRDISEQAWVQGRQFDTSTW HAYFAELYGEKVEITLPDGRIHVTRRSTSDMSVGDFSEYLAKVQAHAANEFGVTYDGEVYA >Mature_140_residues SALYKEFTLRSPGIWPTVLAFIKANAQACLERGHPLRIIVTAEERRRTSEANKFYWGVVLRDISEQAWVQGRQFDTSTWH AYFAELYGEKVEITLPDGRIHVTRRSTSDMSVGDFSEYLAKVQAHAANEFGVTYDGEVYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16095; Mature: 15964
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALYKEFTLRSPGIWPTVLAFIKANAQACLERGHPLRIIVTAEERRRTSEANKFYWGVV CCCHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCEEEEEECHHHHCCCCCCCEEHHHH LRDISEQAWVQGRQFDTSTWHAYFAELYGEKVEITLPDGRIHVTRRSTSDMSVGDFSEYL HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHH AKVQAHAANEFGVTYDGEVYA HHHHHHCCCCCCCCCCCEEEC >Mature Secondary Structure SALYKEFTLRSPGIWPTVLAFIKANAQACLERGHPLRIIVTAEERRRTSEANKFYWGVV CCHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCEEEEEECHHHHCCCCCCCEEHHHH LRDISEQAWVQGRQFDTSTWHAYFAELYGEKVEITLPDGRIHVTRRSTSDMSVGDFSEYL HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHH AKVQAHAANEFGVTYDGEVYA HHHHHHCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA