| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929394
Identifier: 187929394
GI number: 187929394
Start: 2429992
End: 2430789
Strand: Reverse
Name: 187929394
Synonym: Rpic_2315
Alternate gene names: NA
Gene position: 2430789-2429992 (Counterclockwise)
Preceding gene: 187929395
Following gene: 187929393
Centisome position: 61.66
GC content: 56.64
Gene sequence:
>798_bases ATGACCTATCGTCGCCTAACCGACAACGACACGCGAATCGGGCCTTTCATCGTGCTCGGCAAGACCGGCATCGACTACAG GCCTGTTGGATTCTCATTGGACTCAGGAGACAGTGAATACCCCGGCTGCTCGCTGAATTTCCAGGCCTTTGGCTTCTGGC TGCAGATCGCAGTCCCACAACTCATCAAGCCATGGCGCCAGTGGGTTGATCTGAGGAAATACGACTGGGCGCACAGCAAT GGCTACTGGGACGTGCACGCGCGCAAGTACGGTTTCAGCTTGAGTGATGGCTTTATGCAGGTCTTCTATGGGCAGCAGAC CCACGACAGCTCCACCGACAAGGTTTGGTGCAAGCACTTGCCGTGGACTGAATGGCGCTTCGTGCGATTCAGTCTGTACG ACGTGGATGGAAAGCACTTCTGGTCGCAGCTGGGCAATGGGTCAGGCGCCCGAAGTTACGAAGAGCAGCGCGCCCAGGAA GAACGGGTGCCGAAGGTACGGTTCAAATTCATCGACTACGACGGCGATATCATCGAGGCGACTACACACATCGAAGAGCG CGAGTGGTTGCGCGGTGACAAGTGGTGTAAGTGGCTGAGCTTCTTCTATGCACCCAAGGTGGTGCGTTCGCTGGATATCG AATTCTCCAAGGAAGTCGGTCCCAAGAAGGGTTCCTGGAAGGGCGGGGTCATGTGGACCGGTATCAATATGCTGCCTGGA GAACTGCACGAAGGCGCGTTCGCTAGGTATTGCCTCGAACACAACTTGCGTGAGCCTCGTGTGCTGGAGGGCCTGTGA
Upstream 100 bases:
>100_bases AAGGCAAAGGCCTGACCAAGGCCGACCGCCGCGAACTCACATTCCGCTGGATCACCGCCACGCTTATCGCGCTACTCGAG CGCGGCCTTCTGGAGGTTGC
Downstream 100 bases:
>100_bases GCATCTTCTCTCTATCCAGGCCAGCCGTAGAGGTGCTTCCATCTGAGACGCTTGATCGCCTTTGGGCAGAGGCCGAGCGC TTGGGGCGCATCGAGGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTYRRLTDNDTRIGPFIVLGKTGIDYRPVGFSLDSGDSEYPGCSLNFQAFGFWLQIAVPQLIKPWRQWVDLRKYDWAHSN GYWDVHARKYGFSLSDGFMQVFYGQQTHDSSTDKVWCKHLPWTEWRFVRFSLYDVDGKHFWSQLGNGSGARSYEEQRAQE ERVPKVRFKFIDYDGDIIEATTHIEEREWLRGDKWCKWLSFFYAPKVVRSLDIEFSKEVGPKKGSWKGGVMWTGINMLPG ELHEGAFARYCLEHNLREPRVLEGL
Sequences:
>Translated_265_residues MTYRRLTDNDTRIGPFIVLGKTGIDYRPVGFSLDSGDSEYPGCSLNFQAFGFWLQIAVPQLIKPWRQWVDLRKYDWAHSN GYWDVHARKYGFSLSDGFMQVFYGQQTHDSSTDKVWCKHLPWTEWRFVRFSLYDVDGKHFWSQLGNGSGARSYEEQRAQE ERVPKVRFKFIDYDGDIIEATTHIEEREWLRGDKWCKWLSFFYAPKVVRSLDIEFSKEVGPKKGSWKGGVMWTGINMLPG ELHEGAFARYCLEHNLREPRVLEGL >Mature_264_residues TYRRLTDNDTRIGPFIVLGKTGIDYRPVGFSLDSGDSEYPGCSLNFQAFGFWLQIAVPQLIKPWRQWVDLRKYDWAHSNG YWDVHARKYGFSLSDGFMQVFYGQQTHDSSTDKVWCKHLPWTEWRFVRFSLYDVDGKHFWSQLGNGSGARSYEEQRAQEE RVPKVRFKFIDYDGDIIEATTHIEEREWLRGDKWCKWLSFFYAPKVVRSLDIEFSKEVGPKKGSWKGGVMWTGINMLPGE LHEGAFARYCLEHNLREPRVLEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31161; Mature: 31030
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRRLTDNDTRIGPFIVLGKTGIDYRPVGFSLDSGDSEYPGCSLNFQAFGFWLQIAVPQ CCCCCCCCCCCCCCCEEEECCCCCCEECCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHH LIKPWRQWVDLRKYDWAHSNGYWDVHARKYGFSLSDGFMQVFYGQQTHDSSTDKVWCKHL HHHHHHHHHHHHHCCCCCCCCEEEEEHHEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCC PWTEWRFVRFSLYDVDGKHFWSQLGNGSGARSYEEQRAQEERVPKVRFKFIDYDGDIIEA CCCCEEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEH TTHIEEREWLRGDKWCKWLSFFYAPKVVRSLDIEFSKEVGPKKGSWKGGVMWTGINMLPG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCCEEEEECCCCCC ELHEGAFARYCLEHNLREPRVLEGL CHHHHHHHHHHHHCCCCCCCHHCCC >Mature Secondary Structure TYRRLTDNDTRIGPFIVLGKTGIDYRPVGFSLDSGDSEYPGCSLNFQAFGFWLQIAVPQ CCCCCCCCCCCCCCEEEECCCCCCEECCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHH LIKPWRQWVDLRKYDWAHSNGYWDVHARKYGFSLSDGFMQVFYGQQTHDSSTDKVWCKHL HHHHHHHHHHHHHCCCCCCCCEEEEEHHEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCC PWTEWRFVRFSLYDVDGKHFWSQLGNGSGARSYEEQRAQEERVPKVRFKFIDYDGDIIEA CCCCEEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEH TTHIEEREWLRGDKWCKWLSFFYAPKVVRSLDIEFSKEVGPKKGSWKGGVMWTGINMLPG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCCEEEEECCCCCC ELHEGAFARYCLEHNLREPRVLEGL CHHHHHHHHHHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA