| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929384
Identifier: 187929384
GI number: 187929384
Start: 2424802
End: 2426277
Strand: Reverse
Name: 187929384
Synonym: Rpic_2305
Alternate gene names: NA
Gene position: 2426277-2424802 (Counterclockwise)
Preceding gene: 187929385
Following gene: 187929383
Centisome position: 61.54
GC content: 59.96
Gene sequence:
>1476_bases GTGCCGACAGCAAGACAGCTGTGCCGGACTGACCTGTTCTTTCTGCTGCGCTTCGCTCTGGGGCGCAAGGACATCGAGCG GCAATGGCTGTTCGATAGGTGCCGTGAGGTGCAGGCAGCCCCGAACGGGTATCTGGATCTCTGGGCGCGCGAGCACTACA AGTCCACGATCATTACGTATGCGAAGTCCATCCAGGACATTCTCGCCAGCCACGGCGAGGATCCTCTGCCGATGTGGAAC GGCCGTGAAGCGACGATCGGCATCTTCAGCCACACGCGGCCGATCGCCAAAGGCTTCCTGCGTCAGATCAAATACGAGTT CGAGCGGAATCAGCTGCTGAAAGACTGGTTCCCGGACATCCTCTGGCAATACCCCCAGAAGTCAGCCCCAAAGTGGTCGG AAGACGATGGGATTGTCGTCAAACGCAAAGGCAACCCTAAAGAAGCAACGGTCGAGGCCTGGGGCGTTGTTGACGGCCAG CCAATCGGCAAGCACTTCTTGGTGCTGGACTACGACGACATCGTCGTGCCGGCCAGCGTTACCACGCCGGACATGATCCA GAAGACTACAGCATCTCTGGAGCTGAGCTATGCGCTCGGCACTGAAGGTGGCGTCCGGCGGTTCGCTGGCACGCGCTATC ACTTCAATGACACGTATCGCGTGGTGCTTGAGCGCGGGACTGCGATCCCACGAATCTATACCGCGACTGACAACGGCCAG ATCGATGGCAAACCGGTTCTGCTCGCCCGTGAAGCGCTGGCGCAGAAGCGTCGCGACATGGGCCCCTATACCTTCTCCTG CCAGATGATGCAAAACCCCAAGGCGGACGAGACGCAAGGGCTGCAGGAGGTCTGGCTGCGCTACTACGACGGCACGCTGA CCGGCTCACGGATGAACAAGTACATCCTGGTCGATCCGGCCAACGGAAAGCGCAAGTCGAACGACTACACGTCGATCTGG GTGCTTGGCGCCGGCGAAGACCAAAACCTGTACGCGCTGGACATCGTGCGAGACCGCCTGAACCTCACGCAGCGCTGCCG CAAGGTGCTGGAGCTTCACCGTAAGTGGAGGCCACTGCAAGTGCGGTACGAGCACTACGGCATGCAGGCGGACATTCAGG CGCTGCAAATGATGCAGGCGACTGAGGAATACCGCTTTGAGGTAATCGACGTGGGCGGCACTGAGGTGCCGAAGAACGAC CGCATCAAGCGGCTGATCCCAACGCTAGAGCAGGGCAAGTTCTACCTGCCGCGTACGTATCACTACACGAACTACGAAGG CGAGGTACGAGATCTCGTCAAAGACTTCCTCGAGCAGGAATACAAGGCGTTTCCGGTACCGGTGCACGACGACATGCTCG ATTGCCTGGCGCGCAGTCATGAGCCCGAACTGCCGCTGGTGTTCCCCAAGGAAAAGCAACCTGATAGTACGCCGAAGCGC GCCCCGAGCGGCGCTCCAGGCGGCTGGATGAGGTAA
Upstream 100 bases:
>100_bases GTTGCTGGAAAGGGCGGCGGACCGTTGGAGCACAATGTTACTCACGGACTATCTCGGTCGACTCAAGAGTTTCTTGCAGA CATTACCTCCCCAGGAAGTA
Downstream 100 bases:
>100_bases CGATGACCACCCAAGTCGAAGAACGCATCCGCCAGCGCGCGATCGAGCGCGAGGCGGTGGAAGCATTGCGCCGCGAGTGC CGCGATCAGGATGAAGTCAA
Product: phage protein
Products: NA
Alternate protein names: Phage-Like Protein; Phage Protein-Like Protein; Phage Protein
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MPTARQLCRTDLFFLLRFALGRKDIERQWLFDRCREVQAAPNGYLDLWAREHYKSTIITYAKSIQDILASHGEDPLPMWN GREATIGIFSHTRPIAKGFLRQIKYEFERNQLLKDWFPDILWQYPQKSAPKWSEDDGIVVKRKGNPKEATVEAWGVVDGQ PIGKHFLVLDYDDIVVPASVTTPDMIQKTTASLELSYALGTEGGVRRFAGTRYHFNDTYRVVLERGTAIPRIYTATDNGQ IDGKPVLLAREALAQKRRDMGPYTFSCQMMQNPKADETQGLQEVWLRYYDGTLTGSRMNKYILVDPANGKRKSNDYTSIW VLGAGEDQNLYALDIVRDRLNLTQRCRKVLELHRKWRPLQVRYEHYGMQADIQALQMMQATEEYRFEVIDVGGTEVPKND RIKRLIPTLEQGKFYLPRTYHYTNYEGEVRDLVKDFLEQEYKAFPVPVHDDMLDCLARSHEPELPLVFPKEKQPDSTPKR APSGAPGGWMR
Sequences:
>Translated_491_residues MPTARQLCRTDLFFLLRFALGRKDIERQWLFDRCREVQAAPNGYLDLWAREHYKSTIITYAKSIQDILASHGEDPLPMWN GREATIGIFSHTRPIAKGFLRQIKYEFERNQLLKDWFPDILWQYPQKSAPKWSEDDGIVVKRKGNPKEATVEAWGVVDGQ PIGKHFLVLDYDDIVVPASVTTPDMIQKTTASLELSYALGTEGGVRRFAGTRYHFNDTYRVVLERGTAIPRIYTATDNGQ IDGKPVLLAREALAQKRRDMGPYTFSCQMMQNPKADETQGLQEVWLRYYDGTLTGSRMNKYILVDPANGKRKSNDYTSIW VLGAGEDQNLYALDIVRDRLNLTQRCRKVLELHRKWRPLQVRYEHYGMQADIQALQMMQATEEYRFEVIDVGGTEVPKND RIKRLIPTLEQGKFYLPRTYHYTNYEGEVRDLVKDFLEQEYKAFPVPVHDDMLDCLARSHEPELPLVFPKEKQPDSTPKR APSGAPGGWMR >Mature_490_residues PTARQLCRTDLFFLLRFALGRKDIERQWLFDRCREVQAAPNGYLDLWAREHYKSTIITYAKSIQDILASHGEDPLPMWNG REATIGIFSHTRPIAKGFLRQIKYEFERNQLLKDWFPDILWQYPQKSAPKWSEDDGIVVKRKGNPKEATVEAWGVVDGQP IGKHFLVLDYDDIVVPASVTTPDMIQKTTASLELSYALGTEGGVRRFAGTRYHFNDTYRVVLERGTAIPRIYTATDNGQI DGKPVLLAREALAQKRRDMGPYTFSCQMMQNPKADETQGLQEVWLRYYDGTLTGSRMNKYILVDPANGKRKSNDYTSIWV LGAGEDQNLYALDIVRDRLNLTQRCRKVLELHRKWRPLQVRYEHYGMQADIQALQMMQATEEYRFEVIDVGGTEVPKNDR IKRLIPTLEQGKFYLPRTYHYTNYEGEVRDLVKDFLEQEYKAFPVPVHDDMLDCLARSHEPELPLVFPKEKQPDSTPKRA PSGAPGGWMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56851; Mature: 56719
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTARQLCRTDLFFLLRFALGRKDIERQWLFDRCREVQAAPNGYLDLWAREHYKSTIITY CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AKSIQDILASHGEDPLPMWNGREATIGIFSHTRPIAKGFLRQIKYEFERNQLLKDWFPDI HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWQYPQKSAPKWSEDDGIVVKRKGNPKEATVEAWGVVDGQPIGKHFLVLDYDDIVVPASV HHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCC TTPDMIQKTTASLELSYALGTEGGVRRFAGTRYHFNDTYRVVLERGTAIPRIYTATDNGQ CCHHHHHHHHHCEEEEEEECCCCCHHHHCCCEEEECCCEEEEEECCCCCCEEEEECCCCC IDGKPVLLAREALAQKRRDMGPYTFSCQMMQNPKADETQGLQEVWLRYYDGTLTGSRMNK CCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCC YILVDPANGKRKSNDYTSIWVLGAGEDQNLYALDIVRDRLNLTQRCRKVLELHRKWRPLQ EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEE VRYEHYGMQADIQALQMMQATEEYRFEVIDVGGTEVPKNDRIKRLIPTLEQGKFYLPRTY EEHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHCHHHCCCEECCEEE HYTNYEGEVRDLVKDFLEQEYKAFPVPVHDDMLDCLARSHEPELPLVFPKEKQPDSTPKR EECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC APSGAPGGWMR CCCCCCCCCCC >Mature Secondary Structure PTARQLCRTDLFFLLRFALGRKDIERQWLFDRCREVQAAPNGYLDLWAREHYKSTIITY CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AKSIQDILASHGEDPLPMWNGREATIGIFSHTRPIAKGFLRQIKYEFERNQLLKDWFPDI HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWQYPQKSAPKWSEDDGIVVKRKGNPKEATVEAWGVVDGQPIGKHFLVLDYDDIVVPASV HHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCC TTPDMIQKTTASLELSYALGTEGGVRRFAGTRYHFNDTYRVVLERGTAIPRIYTATDNGQ CCHHHHHHHHHCEEEEEEECCCCCHHHHCCCEEEECCCEEEEEECCCCCCEEEEECCCCC IDGKPVLLAREALAQKRRDMGPYTFSCQMMQNPKADETQGLQEVWLRYYDGTLTGSRMNK CCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCC YILVDPANGKRKSNDYTSIWVLGAGEDQNLYALDIVRDRLNLTQRCRKVLELHRKWRPLQ EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEE VRYEHYGMQADIQALQMMQATEEYRFEVIDVGGTEVPKNDRIKRLIPTLEQGKFYLPRTY EEHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHCHHHCCCEECCEEE HYTNYEGEVRDLVKDFLEQEYKAFPVPVHDDMLDCLARSHEPELPLVFPKEKQPDSTPKR EECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC APSGAPGGWMR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA