| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187929369
Identifier: 187929369
GI number: 187929369
Start: 2412618
End: 2413703
Strand: Reverse
Name: 187929369
Synonym: Rpic_2290
Alternate gene names: NA
Gene position: 2413703-2412618 (Counterclockwise)
Preceding gene: 187929370
Following gene: 187929368
Centisome position: 61.22
GC content: 57.46
Gene sequence:
>1086_bases ATGCTCTACATGAAACGCAAATTGCAAGGCCACACTTTCGAGGTGGCCGCAGCGATCGGGGTTTCTGCCGCGGCTGGTCT TGCCGGCGCTGCAATGTCTTCTGGGGCCGCCAGCGACGCTGCTCAGACTCAGGCTGATGCCGCCAATCGCGCTGCGAATA TGCAGAACGCGCAGTGGCAGCAGACGCAAGCCAATCTGCGGCCATACCTGAATCTCGGATCGTCCGCGATCAATCCGCTG CTGCAGGCAATGGGTTATCACGTGAATCCCAATGCAGCGCCGATGCAGACGCGAGATCAGATCTATCAGAACCTATTGCC GCAGTACACGCACACGACTGAAAGTGGCGTAACCATCGATCCCAATTTCAGGACGTGGGGCGGCGCGGATAACGGATGGA GCTATAACCTTGATGCCATCCATCCAGGCGGATCGACGACTACCAACATCGACTATAACGGCCTGAATTCAGCCGTCGAC TCTGCAATGCAACGCCAGCAGTCGAACTCGATGGGCAATTGGGAGGTTGACCCGAACAACATCCTGAACCAGACATTCAC CGCTCCAACTGCTGAGCAAGCGCGCGCGACTCCTGGCTATCAGTTCACTTTCAACCAAGGGATGCAGGGGATCAATAGCA GCGCTGCCGCCAAAGGTCTTGGGGTGTCCGGTGCGAATATCCGTGGCGCTGCAGACTATGCGACTGGTCTGGCAGATTCA ACCTACAACGATGTGTTTAGCCGCGCCCTGAACACGTTCAACACGAACTATGGTTCGGCCGCCAACCGCGTCAATCGCCT TTGGAACCTGGTCAGCAGCGGACAGAACGCGGCCGCGACGAATGGCTCGCTTGGTGCTACGAGTATGAACAGCATAGGCG ACACCATGATGAGTGGTGCGAATGCCTCGGCGGCCGGTCGCGTCGGGTCAGCGAATGCGCTTTCCAGTGGGCTCAACGGG GTGGGGAGTAATGCGCTGCTATATGGTTTGACGCAGAACAACGCCACTCAGTCAGGTTCTTGGGGTACCCGATTCAATCC CAATGACACGAGCACCTACTTCAACGATCCCGCTGCCTACGGTTGA
Upstream 100 bases:
>100_bases TTCATGGGAACAAAGTTGCACAAGGATATTGGCGCGATCTTTCGGCGTCGCAAATTCGAGGCGGTCGAGATGACCTACAC CAAGTGGATTGGGAGCTGAC
Downstream 100 bases:
>100_bases ATGTCATGCCACTTGATCCCTCGATTCCGCTCAAGCTAGCGACGCCGGAAAATAACCCTCTGCAGACAGCGATGCAGGCT GCTCAGTTCAAGTACATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLYMKRKLQGHTFEVAAAIGVSAAAGLAGAAMSSGAASDAAQTQADAANRAANMQNAQWQQTQANLRPYLNLGSSAINPL LQAMGYHVNPNAAPMQTRDQIYQNLLPQYTHTTESGVTIDPNFRTWGGADNGWSYNLDAIHPGGSTTTNIDYNGLNSAVD SAMQRQQSNSMGNWEVDPNNILNQTFTAPTAEQARATPGYQFTFNQGMQGINSSAAAKGLGVSGANIRGAADYATGLADS TYNDVFSRALNTFNTNYGSAANRVNRLWNLVSSGQNAAATNGSLGATSMNSIGDTMMSGANASAAGRVGSANALSSGLNG VGSNALLYGLTQNNATQSGSWGTRFNPNDTSTYFNDPAAYG
Sequences:
>Translated_361_residues MLYMKRKLQGHTFEVAAAIGVSAAAGLAGAAMSSGAASDAAQTQADAANRAANMQNAQWQQTQANLRPYLNLGSSAINPL LQAMGYHVNPNAAPMQTRDQIYQNLLPQYTHTTESGVTIDPNFRTWGGADNGWSYNLDAIHPGGSTTTNIDYNGLNSAVD SAMQRQQSNSMGNWEVDPNNILNQTFTAPTAEQARATPGYQFTFNQGMQGINSSAAAKGLGVSGANIRGAADYATGLADS TYNDVFSRALNTFNTNYGSAANRVNRLWNLVSSGQNAAATNGSLGATSMNSIGDTMMSGANASAAGRVGSANALSSGLNG VGSNALLYGLTQNNATQSGSWGTRFNPNDTSTYFNDPAAYG >Mature_361_residues MLYMKRKLQGHTFEVAAAIGVSAAAGLAGAAMSSGAASDAAQTQADAANRAANMQNAQWQQTQANLRPYLNLGSSAINPL LQAMGYHVNPNAAPMQTRDQIYQNLLPQYTHTTESGVTIDPNFRTWGGADNGWSYNLDAIHPGGSTTTNIDYNGLNSAVD SAMQRQQSNSMGNWEVDPNNILNQTFTAPTAEQARATPGYQFTFNQGMQGINSSAAAKGLGVSGANIRGAADYATGLADS TYNDVFSRALNTFNTNYGSAANRVNRLWNLVSSGQNAAATNGSLGATSMNSIGDTMMSGANASAAGRVGSANALSSGLNG VGSNALLYGLTQNNATQSGSWGTRFNPNDTSTYFNDPAAYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37620; Mature: 37620
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYMKRKLQGHTFEVAAAIGVSAAAGLAGAAMSSGAASDAAQTQADAANRAANMQNAQWQ CCCCCCHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHH QTQANLRPYLNLGSSAINPLLQAMGYHVNPNAAPMQTRDQIYQNLLPQYTHTTESGVTID HHHHHCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCEEC PNFRTWGGADNGWSYNLDAIHPGGSTTTNIDYNGLNSAVDSAMQRQQSNSMGNWEVDPNN CCCCCCCCCCCCCEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH ILNQTFTAPTAEQARATPGYQFTFNQGMQGINSSAAAKGLGVSGANIRGAADYATGLADS HHHHCCCCCCHHHHCCCCCEEEEHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCC TYNDVFSRALNTFNTNYGSAANRVNRLWNLVSSGQNAAATNGSLGATSMNSIGDTMMSGA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC NASAAGRVGSANALSSGLNGVGSNALLYGLTQNNATQSGSWGTRFNPNDTSTYFNDPAAY CCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure MLYMKRKLQGHTFEVAAAIGVSAAAGLAGAAMSSGAASDAAQTQADAANRAANMQNAQWQ CCCCCCHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHH QTQANLRPYLNLGSSAINPLLQAMGYHVNPNAAPMQTRDQIYQNLLPQYTHTTESGVTID HHHHHCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCEEC PNFRTWGGADNGWSYNLDAIHPGGSTTTNIDYNGLNSAVDSAMQRQQSNSMGNWEVDPNN CCCCCCCCCCCCCEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH ILNQTFTAPTAEQARATPGYQFTFNQGMQGINSSAAAKGLGVSGANIRGAADYATGLADS HHHHCCCCCCHHHHCCCCCEEEEHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCC TYNDVFSRALNTFNTNYGSAANRVNRLWNLVSSGQNAAATNGSLGATSMNSIGDTMMSGA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC NASAAGRVGSANALSSGLNGVGSNALLYGLTQNNATQSGSWGTRFNPNDTSTYFNDPAAY CCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA