Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187929364

Identifier: 187929364

GI number: 187929364

Start: 2405391

End: 2405873

Strand: Reverse

Name: 187929364

Synonym: Rpic_2285

Alternate gene names: NA

Gene position: 2405873-2405391 (Counterclockwise)

Preceding gene: 187929365

Following gene: 187929363

Centisome position: 61.02

GC content: 58.39

Gene sequence:

>483_bases
GTGAGTAGCTTTGATGATGCTTTTGACGCCCTAATTGGGAATGAGGGCGGCTACAGCAACAACCCGGCTGACCCGGGAGG
GGAAACAATGTGGGGCATCACCGCCCGCGTAGCCCGCGCAAGTGGCTATACCGGCCCGATGCGAGAACTGCCCCAAGTAA
CGGCAAAAGCCATTGCCAAGAAGCTCTATTGGGATCCGTTGCATCTCGATGAATTAGATCCGCGTGTGGCGTTTCAGATC
TTCGATGCCAACTACAACGGTGGTCATCCGGTGATCTGGATGCAAGGCGCGTCCGGCGCCAAGGTCGACGGTCTGCTCGG
ACCGCAGACAATCGCCGCAGTGCAAGCGACCGATCCCCTACGTTTCATGATGCGCTGGAACTCGATCCGCCTGCGTTACT
TCACGGCCATCAAGACGTGGCTCACCTTCGGGCGAGGCTGGGCAATCCGCATCGCCAACAACCTTTGGAAAGGAGCTGCG
TGA

Upstream 100 bases:

>100_bases
TCAAACCATGAACTCGTTTGGTTTGTTGCCGCCCTGAACATAGCCTGGATTTGCTCTCAACTTTGGTGGGGATGGGGAAA
GTATCTTCGGGAGAAGAAAG

Downstream 100 bases:

>100_bases
TGCTTCCAATCGCTCTCGCACTGGCGCAGTTCGCGCCGATGATCGCCGGCTGGCTTGGCGGCCAGAAGGCCGAAGAAGTT
GCTGGCAAAGTGGTCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQI
FDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA

Sequences:

>Translated_160_residues
MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQI
FDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA
>Mature_159_residues
SSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQIF
DANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA

Specific function: Unknown

COG id: COG3926

COG function: function code R; Putative secretion activating protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17634; Mature: 17503

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAK
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KLYWDPLHLDELDPRVAFQIFDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPL
HHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHH
RFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA
HHHHHHCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAK
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KLYWDPLHLDELDPRVAFQIFDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPL
HHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHH
RFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA
HHHHHHCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA