| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929331
Identifier: 187929331
GI number: 187929331
Start: 2364192
End: 2365787
Strand: Reverse
Name: 187929331
Synonym: Rpic_2252
Alternate gene names: NA
Gene position: 2365787-2364192 (Counterclockwise)
Preceding gene: 187929332
Following gene: 187929324
Centisome position: 60.01
GC content: 61.9
Gene sequence:
>1596_bases ATGCCCAACTTGTCTTGTTTGAGCCCATGCAGGCGCGCGCTGAAGGCCACGCGCGTGCTGGCCGCCGCCTGCCTGCTGTT GACCGTTAGTTATTCTGGAGTGTCGATGTCCGCCAACGATTCGTATTCCCGCAAGCCCGTGGCCTGGCCGCGTATGCAGG CCGCCGCGCAGGCCGACCCGAAAGCCCCCGCTGCCGTGCTGTTGGGCGTGCAATGGATCAACCCGCTGATGTGGCGGGAC TACCCCACCCAATGGAACTTACTTTGGGCGCAGGGCCTGGCCCAGCCCAACGCCAATGATCGCGATGCAGCAAGATTCAA GCTTGGGGATGCGGTAGGGGAATTAACGCTCGGGCTAGAGCGCAAGAAGCGTCTAGATGACTACCCGCAGATCAAGCGCG ACAGGTTCTGGGGAGCCTATAGCAAGCTGTTGAGTGTTCCTCTGAGCACTTTCAGTTATCGCTACTTCAACTCGGGTTTC TACTCGATGGAGCAGGGTACCGACCGGCCCGACTTCATGGATGCCATCGTGTTCGCGGGTATGCCGCGCGAGTGGATCGG TACGCCCACGTACCTGAAGAACTATGCCCTTGGCGATGATTGGAGCGTGGATGAACTGCTGAAAGAGCAGGCCGCCATGG GCATGCCCGCGCCCAGCTATCTGGCCTACGACGCCGCACATTCCGAGCAACGCATGCAGGACTACTGGGTCAAGCTGCAC AAAGACCCGAAGACCGGCGAAACCGTGCGCGGCCTGCGTACTCGTGAACCAATGATCGTTGGCGAGTCCATTCTGTCGTT GCAAGGTGCACGGAGACTGATGTTCGACAAGGTGGCCGATGCCGCCTTCGCCAAAAGCATGAAGTACAACCCCAGCGGCA AGCTGCCACAGGTGGTGCTCAAGGCTGGCGACGAGACCGTGGGCTTCTACGATCTGCAAGAGGCGCTCAAATTCCTGGCC GATAACCCCAACAAGCTGGTGTGGGTGTGGAACATGGATGCGCCCAACTACCCGATGGGCGAGCAGACCAACGAAAACAC CGCCCTCCTCATCCTCGGCCACCCCAGCGCCAACTGGGGCTACGCGCCGCTCGCGTCCATCTACACGCCGCAGCATCACG AAGGCGGCATCGGCGCCAAGGCCGCCAACCCGGGTGGCCCGTGGAGCCCGTTGATGAAGACGCTGCAAGAACAGGCCTCC CAGGATCACCCGGTCGAACGTGTCTACCACGACGTGCACAAGCACACCACCAACGTGAATGCCTTGATGGGGCCGCTGCA CGCCGCCGTCCACCAGCAATGGCCGGATCTGGACCAAATCGGCAATTTCTACAGCGTGTCCCAAGTCATGGAAGGCCCGG TGCGTGCCGCCAGCTTCGCGGTCAACGCCGCGTTTGCCGCTGCCTACGCCAACCAAAGCGGCAAGAGTGCCGTCGTCACC AGCGTGGCCGATGCCAAAGACAGCTGGGCGGTACTGATCGGCCCCCCGCCGGGCTGGCAGCCGACGCCGCCAATTACGAA ATGGGACCGTGCGCGGGGTGAGGGCCGTGCGTACTGGCCGTGGTTTGGCAAACAAACGGGTGACCGAAAATCCTGA
Upstream 100 bases:
>100_bases GTCACGGCGATCGGGATCCCCGGCGAGCGCAACCCGGGGCGCATGTACTCCCACCACACGCCGGACGACACCGGTACCCC CTATGCCTGAGGGAGCTGCC
Downstream 100 bases:
>100_bases GTTTGCCAATCAAACTAGCCTGGAAGTATGAGGCGCTGACTGGTTATTTACTCACGCCAAGCAGCGCCAGCACACCCAGC ACCAGGAAGATCAGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPNLSCLSPCRRALKATRVLAAACLLLTVSYSGVSMSANDSYSRKPVAWPRMQAAAQADPKAPAAVLLGVQWINPLMWRD YPTQWNLLWAQGLAQPNANDRDAARFKLGDAVGELTLGLERKKRLDDYPQIKRDRFWGAYSKLLSVPLSTFSYRYFNSGF YSMEQGTDRPDFMDAIVFAGMPREWIGTPTYLKNYALGDDWSVDELLKEQAAMGMPAPSYLAYDAAHSEQRMQDYWVKLH KDPKTGETVRGLRTREPMIVGESILSLQGARRLMFDKVADAAFAKSMKYNPSGKLPQVVLKAGDETVGFYDLQEALKFLA DNPNKLVWVWNMDAPNYPMGEQTNENTALLILGHPSANWGYAPLASIYTPQHHEGGIGAKAANPGGPWSPLMKTLQEQAS QDHPVERVYHDVHKHTTNVNALMGPLHAAVHQQWPDLDQIGNFYSVSQVMEGPVRAASFAVNAAFAAAYANQSGKSAVVT SVADAKDSWAVLIGPPPGWQPTPPITKWDRARGEGRAYWPWFGKQTGDRKS
Sequences:
>Translated_531_residues MPNLSCLSPCRRALKATRVLAAACLLLTVSYSGVSMSANDSYSRKPVAWPRMQAAAQADPKAPAAVLLGVQWINPLMWRD YPTQWNLLWAQGLAQPNANDRDAARFKLGDAVGELTLGLERKKRLDDYPQIKRDRFWGAYSKLLSVPLSTFSYRYFNSGF YSMEQGTDRPDFMDAIVFAGMPREWIGTPTYLKNYALGDDWSVDELLKEQAAMGMPAPSYLAYDAAHSEQRMQDYWVKLH KDPKTGETVRGLRTREPMIVGESILSLQGARRLMFDKVADAAFAKSMKYNPSGKLPQVVLKAGDETVGFYDLQEALKFLA DNPNKLVWVWNMDAPNYPMGEQTNENTALLILGHPSANWGYAPLASIYTPQHHEGGIGAKAANPGGPWSPLMKTLQEQAS QDHPVERVYHDVHKHTTNVNALMGPLHAAVHQQWPDLDQIGNFYSVSQVMEGPVRAASFAVNAAFAAAYANQSGKSAVVT SVADAKDSWAVLIGPPPGWQPTPPITKWDRARGEGRAYWPWFGKQTGDRKS >Mature_530_residues PNLSCLSPCRRALKATRVLAAACLLLTVSYSGVSMSANDSYSRKPVAWPRMQAAAQADPKAPAAVLLGVQWINPLMWRDY PTQWNLLWAQGLAQPNANDRDAARFKLGDAVGELTLGLERKKRLDDYPQIKRDRFWGAYSKLLSVPLSTFSYRYFNSGFY SMEQGTDRPDFMDAIVFAGMPREWIGTPTYLKNYALGDDWSVDELLKEQAAMGMPAPSYLAYDAAHSEQRMQDYWVKLHK DPKTGETVRGLRTREPMIVGESILSLQGARRLMFDKVADAAFAKSMKYNPSGKLPQVVLKAGDETVGFYDLQEALKFLAD NPNKLVWVWNMDAPNYPMGEQTNENTALLILGHPSANWGYAPLASIYTPQHHEGGIGAKAANPGGPWSPLMKTLQEQASQ DHPVERVYHDVHKHTTNVNALMGPLHAAVHQQWPDLDQIGNFYSVSQVMEGPVRAASFAVNAAFAAAYANQSGKSAVVTS VADAKDSWAVLIGPPPGWQPTPPITKWDRARGEGRAYWPWFGKQTGDRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58936; Mature: 58805
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLSCLSPCRRALKATRVLAAACLLLTVSYSGVSMSANDSYSRKPVAWPRMQAAAQADP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHCCCC KAPAAVLLGVQWINPLMWRDYPTQWNLLWAQGLAQPNANDRDAARFKLGDAVGELTLGLE CCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHH RKKRLDDYPQIKRDRFWGAYSKLLSVPLSTFSYRYFNSGFYSMEQGTDRPDFMDAIVFAG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCC MPREWIGTPTYLKNYALGDDWSVDELLKEQAAMGMPAPSYLAYDAAHSEQRMQDYWVKLH CCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHC KDPKTGETVRGLRTREPMIVGESILSLQGARRLMFDKVADAAFAKSMKYNPSGKLPQVVL CCCCCCHHHHCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KAGDETVGFYDLQEALKFLADNPNKLVWVWNMDAPNYPMGEQTNENTALLILGHPSANWG HCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC YAPLASIYTPQHHEGGIGAKAANPGGPWSPLMKTLQEQASQDHPVERVYHDVHKHTTNVN CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH ALMGPLHAAVHQQWPDLDQIGNFYSVSQVMEGPVRAASFAVNAAFAAAYANQSGKSAVVT HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEE SVADAKDSWAVLIGPPPGWQPTPPITKWDRARGEGRAYWPWFGKQTGDRKS EHHCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure PNLSCLSPCRRALKATRVLAAACLLLTVSYSGVSMSANDSYSRKPVAWPRMQAAAQADP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHCCCC KAPAAVLLGVQWINPLMWRDYPTQWNLLWAQGLAQPNANDRDAARFKLGDAVGELTLGLE CCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHH RKKRLDDYPQIKRDRFWGAYSKLLSVPLSTFSYRYFNSGFYSMEQGTDRPDFMDAIVFAG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCC MPREWIGTPTYLKNYALGDDWSVDELLKEQAAMGMPAPSYLAYDAAHSEQRMQDYWVKLH CCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHC KDPKTGETVRGLRTREPMIVGESILSLQGARRLMFDKVADAAFAKSMKYNPSGKLPQVVL CCCCCCHHHHCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KAGDETVGFYDLQEALKFLADNPNKLVWVWNMDAPNYPMGEQTNENTALLILGHPSANWG HCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC YAPLASIYTPQHHEGGIGAKAANPGGPWSPLMKTLQEQASQDHPVERVYHDVHKHTTNVN CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH ALMGPLHAAVHQQWPDLDQIGNFYSVSQVMEGPVRAASFAVNAAFAAAYANQSGKSAVVT HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEE SVADAKDSWAVLIGPPPGWQPTPPITKWDRARGEGRAYWPWFGKQTGDRKS EHHCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA