Click here to switch to the map view.

The map label for this gene is 187929317

Identifier: 187929317

GI number: 187929317

Start: 2347830

End: 2348414

Strand: Direct

Name: 187929317

Synonym: Rpic_2238

Alternate gene names: NA

Gene position: 2347830-2348414 (Clockwise)

Preceding gene: 187929316

Following gene: 187929318

Centisome position: 59.55

GC content: 62.74

Gene sequence:

>585_bases
ATGAAATCGATCTGCGTCTATTGCGGTTCCAGCCCGGGTGAGCGCCCGGAATACAAAGCCAACGCCATCGCGCTCGGCAA
TGAGATGGTCAAGCGCGACCTCACGCTCGTCTACGGCGGCGGCAACGTCGGCCTGATGGGCGTGGTGGCCGACGCGGTGC
TGCACGGCGGCAGCCCGGTCATCGGCATCATCCCGAAATCGCTGGTGCGCAAGGAGGTCGGGCATAAGGAGTTGACCGAA
CTGCACATCGTCGACAGCATGCACCAGCGCAAACAGATGATGGCCGACCGTGCAGACGCCTTCATCGCCATGCCCGGCGG
CGTCGGCACCTACGAAGAGCTGTTCGAGACGTTCACGTGGCTGCAGCTCGGCTATCACAACAAGCCAATCGGCCTGCTGA
ACGTGGCGGGTTTTTACGACAAGCTGCTCGCCTTCATCGACCATGCCGTGCAGGAAGGCTTCCTCAAGCGCCACCACGCT
GATCTGCTGCACGTGAGCAACGATCCTGCCGCGTTGATCGACATGCTGGCGCGTGCGCCGCGCGAGACGGTCGACAAGTG
GTCTGAACGTCGCGAGCGCACGTAG

Upstream 100 bases:

>100_bases
CTTACCTGCGCGGCAAGCCGCGGCGAGCGTTTGATTTGCTGGCGGTCAGCCGCAGCAACGATCCGCCCATTGGCAACCCC
GGCACCACCACTCCTGCTCA

Downstream 100 bases:

>100_bases
GGCTTCATGCAGGATCCGTTGCTGACGATGGCGCTGTATGTGGCCCTGGTGCTGATCATGCCGGGGCCCACGAACACGCT
GCTGCTCTCGTCCGGCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKSICVYCGSSPGERPEYKANAIALGNEMVKRDLTLVYGGGNVGLMGVVADAVLHGGSPVIGIIPKSLVRKEVGHKELTE
LHIVDSMHQRKQMMADRADAFIAMPGGVGTYEELFETFTWLQLGYHNKPIGLLNVAGFYDKLLAFIDHAVQEGFLKRHHA
DLLHVSNDPAALIDMLARAPRETVDKWSERRERT

Sequences:

>Translated_194_residues
MKSICVYCGSSPGERPEYKANAIALGNEMVKRDLTLVYGGGNVGLMGVVADAVLHGGSPVIGIIPKSLVRKEVGHKELTE
LHIVDSMHQRKQMMADRADAFIAMPGGVGTYEELFETFTWLQLGYHNKPIGLLNVAGFYDKLLAFIDHAVQEGFLKRHHA
DLLHVSNDPAALIDMLARAPRETVDKWSERRERT
>Mature_194_residues
MKSICVYCGSSPGERPEYKANAIALGNEMVKRDLTLVYGGGNVGLMGVVADAVLHGGSPVIGIIPKSLVRKEVGHKELTE
LHIVDSMHQRKQMMADRADAFIAMPGGVGTYEELFETFTWLQLGYHNKPIGLLNVAGFYDKLLAFIDHAVQEGFLKRHHA
DLLHVSNDPAALIDMLARAPRETVDKWSERRERT

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=43.3497536945813, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21467; Mature: 21467

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSICVYCGSSPGERPEYKANAIALGNEMVKRDLTLVYGGGNVGLMGVVADAVLHGGSPV
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHCCCCCE
IGIIPKSLVRKEVGHKELTELHIVDSMHQRKQMMADRADAFIAMPGGVGTYEELFETFTW
EECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
LQLGYHNKPIGLLNVAGFYDKLLAFIDHAVQEGFLKRHHADLLHVSNDPAALIDMLARAP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
RETVDKWSERRERT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKSICVYCGSSPGERPEYKANAIALGNEMVKRDLTLVYGGGNVGLMGVVADAVLHGGSPV
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHCCCCCE
IGIIPKSLVRKEVGHKELTELHIVDSMHQRKQMMADRADAFIAMPGGVGTYEELFETFTW
EECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
LQLGYHNKPIGLLNVAGFYDKLLAFIDHAVQEGFLKRHHADLLHVSNDPAALIDMLARAP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
RETVDKWSERRERT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]