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The map label for this gene is mmgC [H]

Identifier: 187929276

GI number: 187929276

Start: 2306956

End: 2308152

Strand: Reverse

Name: mmgC [H]

Synonym: Rpic_2197

Alternate gene names: 187929276

Gene position: 2308152-2306956 (Counterclockwise)

Preceding gene: 187929277

Following gene: 187929275

Centisome position: 58.54

GC content: 62.16

Gene sequence:

>1197_bases
ATGGATCTGAACTACTCGGCGGCCGATGATGCGTTCCGCCAGGAAGTCCGCAGCTGGCTGGAAGCCAATCTGCCCAAGGA
CATCCAGGACAAGGTGTTGAACCACCGGCGCCTGAACCGCGAAGATTTCGTTCGCTGGCACAAGGCGCTCGCGGGCAAGG
GCTGGTCGGTGCCGCATTGGCCGGTCGAGTGGGGCGGTACCGGCTGGTCCCCCATCCAAAAGCACATCTGGGACGAAGAG
TGCGCGCGGGTCGGCGCGCCCGGCGTTCTGCCGTTCGGCGTCAGCATGGTCGCGCCCGTCATCATGAAGTACGGCAATGA
AGCGCAGAAGCGCTACTTCCTGCCGCGCATCGTTGATTGCACCGATTGGTGGTGCCAGGGCTATTCGGAGCCGGGGTCCG
GTTCCGATCTGGCCTCGGTGAAGACGCGTGCCGTGCGCGAAGGCGATCACTACATCGTCAACGGCCAGAAGACGTGGACC
ACGCTCGGCCAACACGCCGACATGATCTTCTGTCTGGTCCGCACGGATCCGGACGCGAAGAAGCAAGAGGGTATTTCGTT
CCTGTTGATCGATATGAAGACGCCAGGAATCACCGTGCGCCCGATCATCATGCTCGACGAAGAGCACGAGGTGAACGAAG
TCTTCTTCGACAACGTGAAGGTGCCGGTTCAAAACCTGATCGGTGATGAGAACCGCGGCTGGACGTACGCCAAGTACCTG
CTCGGCCACGAGCGCACGGGCATTGCGCGTGTGGGCAATTCCAAGCGCGAACTGGCGTTTCTCAAGCGTGTCGCCCAGCA
ACACCAGAAGAACGGCAAGCCGCTGCTGCAGGATCCGGTATTCGGTGCCAAGGTAGCCTCGCTGGAAATCGAACTGCTGG
CGCTGGAGATGACGGTGCTGCGTGTGGTGTCGAGCGAGAACGCCGGCAAGGGCCCGGGCCCCGAGGCGTCGCTGCTCAAG
ATCAAGGGCACGCAGATCCAGCAGATGCTGACCGAGTTGATGGTCGAGGCCGCGGGGCCGTACGCCCAGCCGTTCGATCC
GAGCTACCTCGAAGGCGACACCTTGCAGGCCGTGACGGGCGACAACGACGCCGCACCGCTCGCGCCGTACTACTTCAACT
ATCGCAAGACCTCGATCTACGGCGGGTCGAACGAGATCCAGCGCAACATCATCTCGCAGATGATCCTTGGCGTCTGA

Upstream 100 bases:

>100_bases
GCAGCCCGTGCACTAGCAGCCCCGATTCAGGTCCGCGCCGGTCCGACAGAACGTTCTCCACCGATTTGCCACGGTGGGGA
GCCAACCACAGGAGACAGGC

Downstream 100 bases:

>100_bases
CCAGAACGGCGACAGAACACATAGCGGAGACAAACATGGATTTCTCGTTCACCGACGAACAGAAGCAACTTGCCGATGCG
GTGCGCCGCTTCATTGAGAA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDLNYSAADDAFRQEVRSWLEANLPKDIQDKVLNHRRLNREDFVRWHKALAGKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARVGAPGVLPFGVSMVAPVIMKYGNEAQKRYFLPRIVDCTDWWCQGYSEPGSGSDLASVKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPDAKKQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVKVPVQNLIGDENRGWTYAKYL
LGHERTGIARVGNSKRELAFLKRVAQQHQKNGKPLLQDPVFGAKVASLEIELLALEMTVLRVVSSENAGKGPGPEASLLK
IKGTQIQQMLTELMVEAAGPYAQPFDPSYLEGDTLQAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV

Sequences:

>Translated_398_residues
MDLNYSAADDAFRQEVRSWLEANLPKDIQDKVLNHRRLNREDFVRWHKALAGKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARVGAPGVLPFGVSMVAPVIMKYGNEAQKRYFLPRIVDCTDWWCQGYSEPGSGSDLASVKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPDAKKQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVKVPVQNLIGDENRGWTYAKYL
LGHERTGIARVGNSKRELAFLKRVAQQHQKNGKPLLQDPVFGAKVASLEIELLALEMTVLRVVSSENAGKGPGPEASLLK
IKGTQIQQMLTELMVEAAGPYAQPFDPSYLEGDTLQAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
>Mature_398_residues
MDLNYSAADDAFRQEVRSWLEANLPKDIQDKVLNHRRLNREDFVRWHKALAGKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARVGAPGVLPFGVSMVAPVIMKYGNEAQKRYFLPRIVDCTDWWCQGYSEPGSGSDLASVKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPDAKKQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVKVPVQNLIGDENRGWTYAKYL
LGHERTGIARVGNSKRELAFLKRVAQQHQKNGKPLLQDPVFGAKVASLEIELLALEMTVLRVVSSENAGKGPGPEASLLK
IKGTQIQQMLTELMVEAAGPYAQPFDPSYLEGDTLQAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=28.5294117647059, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI4557231, Length=343, Percent_Identity=27.4052478134111, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI187960098, Length=343, Percent_Identity=27.4052478134111, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI4501857, Length=406, Percent_Identity=24.8768472906404, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI4557233, Length=357, Percent_Identity=25.4901960784314, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI226958412, Length=227, Percent_Identity=29.0748898678414, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI226958414, Length=180, Percent_Identity=31.6666666666667, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI211971008, Length=308, Percent_Identity=25.6493506493506, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI48976061, Length=308, Percent_Identity=25.6493506493506, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI7656849, Length=354, Percent_Identity=25.7062146892655, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4557235, Length=157, Percent_Identity=33.7579617834395, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI76496475, Length=157, Percent_Identity=33.7579617834395, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI21361497, Length=291, Percent_Identity=27.8350515463918, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI38505218, Length=310, Percent_Identity=23.8709677419355, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4503943, Length=342, Percent_Identity=23.3918128654971, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7669494, Length=264, Percent_Identity=25.7575757575758, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=401, Percent_Identity=23.1920199501247, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1786223, Length=281, Percent_Identity=24.5551601423488, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=419, Percent_Identity=26.2529832935561, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=357, Percent_Identity=26.6106442577031, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=342, Percent_Identity=26.9005847953216, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=372, Percent_Identity=26.8817204301075, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=344, Percent_Identity=27.0348837209302, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=242, Percent_Identity=30.1652892561983, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=203, Percent_Identity=33.0049261083744, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=201, Percent_Identity=31.8407960199005, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=201, Percent_Identity=31.8407960199005, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=274, Percent_Identity=24.8175182481752, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=211, Percent_Identity=28.9099526066351, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=211, Percent_Identity=28.436018957346, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=228, Percent_Identity=26.7543859649123, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17533517, Length=350, Percent_Identity=23.7142857142857, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=265, Percent_Identity=24.5283018867925, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=388, Percent_Identity=24.4845360824742, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI21355753, Length=281, Percent_Identity=28.4697508896797, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24666513, Length=355, Percent_Identity=24.5070422535211, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24660351, Length=354, Percent_Identity=26.271186440678, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI281363737, Length=282, Percent_Identity=27.6595744680851, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646207, Length=339, Percent_Identity=24.7787610619469, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44639; Mature: 44639

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNYSAADDAFRQEVRSWLEANLPKDIQDKVLNHRRLNREDFVRWHKALAGKGWSVPHW
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PVEWGGTGWSPIQKHIWDEECARVGAPGVLPFGVSMVAPVIMKYGNEAQKRYFLPRIVDC
CCCCCCCCCHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHCCC
TDWWCQGYSEPGSGSDLASVKTRAVREGDHYIVNGQKTWTTLGQHADMIFCLVRTDPDAK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCCH
KQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVKVPVQNLIGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGNSKRELAFLKRVAQQHQKNGKPLLQDPVFGAKVASLEIELLALEMTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHEEEEHHHHHHHHH
RVVSSENAGKGPGPEASLLKIKGTQIQQMLTELMVEAAGPYAQPFDPSYLEGDTLQAVTG
HHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
DNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
CCCCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNYSAADDAFRQEVRSWLEANLPKDIQDKVLNHRRLNREDFVRWHKALAGKGWSVPHW
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PVEWGGTGWSPIQKHIWDEECARVGAPGVLPFGVSMVAPVIMKYGNEAQKRYFLPRIVDC
CCCCCCCCCHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHCCC
TDWWCQGYSEPGSGSDLASVKTRAVREGDHYIVNGQKTWTTLGQHADMIFCLVRTDPDAK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCCH
KQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVKVPVQNLIGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGNSKRELAFLKRVAQQHQKNGKPLLQDPVFGAKVASLEIELLALEMTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHEEEEHHHHHHHHH
RVVSSENAGKGPGPEASLLKIKGTQIQQMLTELMVEAAGPYAQPFDPSYLEGDTLQAVTG
HHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
DNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
CCCCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]