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The map label for this gene is ureD [H]

Identifier: 187929267

GI number: 187929267

Start: 2297779

End: 2298666

Strand: Reverse

Name: ureD [H]

Synonym: Rpic_2188

Alternate gene names: 187929267

Gene position: 2298666-2297779 (Counterclockwise)

Preceding gene: 187929268

Following gene: 187929266

Centisome position: 58.3

GC content: 68.02

Gene sequence:

>888_bases
ATGCGCCATCCCGATTTTCCTGTGCCGCCGCAGACCGATTCGTTCGCGTCCTGGGAAGCCTCGCTGCGCCTGGCGTTTGC
ACGGCGCGGTGAGCGCACCGTGCTGGCCACGTGCCGGCATCAGGGGCCGCTGCGGGTGCAGAAGGCGCTGTATCCGGAAG
GCGAGGGCGTGTGCCATGCCGTCATGCTGCATCCGCCCGCAGGCATTGCCGGTGGCGATGTGCTCGATATCAACATCGAA
CTCGGTGCCGACGCGCATGCCGTGCTGACCACGCCCGGCGCCACCAAGTGGTACAAGTCGCTCGGCCGCACGGCCACGCA
GCGCGTTGCCATCCGGGCAGAGACAGGCGCGCGGCTCGACTGGGTGCCACAAGAGAACATCGTCTTCAACCAGGCCTGCC
CGATCATCGACCTGACGCTGGATCTGGCACCGGGCGCCACCGCCATCGGTTGGGACGCGACCATGCTCGGCCGCCATGCC
GCCGGTGAATCGTGGGCCGAAGGCCGTATCGTCTTGCGCACCGCATTGCGCTGCAACGGCCAGCCGCTGTGGATTGAATC
GGCCGCGTTCGACGCGCAATCGCCCGTGCTGAATGCGACGACGGGCATGGCCGGCTTCCACGTTGTCGGCACGCTGTGGG
CCGTGGGCGAGGGCGCCACCGAAGCCCTGGCCGAATCGATGGCCGAGCACCTGCCGTACAACGACGACCTGCGCGCGGGC
GTCACCTGCCTCACGCAAGATGCGCCCGGCCTGCCAAACGTTTTGTTGCTGCGCGTGCTTGCACGCCGGCCCGAAGATGC
ACGTGCCTTGTTGGCCCAGACGTGGCTGGCGCTGCGCGAACCGATGCATGGCGTAGCGGGCCGTCCGCTGCGGCTCTGGT
CTACATGA

Upstream 100 bases:

>100_bases
CCCCGGCTGATGCCCCGGCATTCGACGGAAAAAGTCGAATGCCAAATCTGTGGCATCTGGCTATGATGAGAAAATTCCTA
GCCGCCGTGCTGCCTTCCTG

Downstream 100 bases:

>100_bases
CGGCCACATGATGGCAACGTGACCTCGCATCGCCCGATCTGAACTGTACTGAATTGACCCTCACCGAAGAGAGCCCCACG
TGGAACTGACCCCGCGCGAA

Product: Urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRHPDFPVPPQTDSFASWEASLRLAFARRGERTVLATCRHQGPLRVQKALYPEGEGVCHAVMLHPPAGIAGGDVLDINIE
LGADAHAVLTTPGATKWYKSLGRTATQRVAIRAETGARLDWVPQENIVFNQACPIIDLTLDLAPGATAIGWDATMLGRHA
AGESWAEGRIVLRTALRCNGQPLWIESAAFDAQSPVLNATTGMAGFHVVGTLWAVGEGATEALAESMAEHLPYNDDLRAG
VTCLTQDAPGLPNVLLLRVLARRPEDARALLAQTWLALREPMHGVAGRPLRLWST

Sequences:

>Translated_295_residues
MRHPDFPVPPQTDSFASWEASLRLAFARRGERTVLATCRHQGPLRVQKALYPEGEGVCHAVMLHPPAGIAGGDVLDINIE
LGADAHAVLTTPGATKWYKSLGRTATQRVAIRAETGARLDWVPQENIVFNQACPIIDLTLDLAPGATAIGWDATMLGRHA
AGESWAEGRIVLRTALRCNGQPLWIESAAFDAQSPVLNATTGMAGFHVVGTLWAVGEGATEALAESMAEHLPYNDDLRAG
VTCLTQDAPGLPNVLLLRVLARRPEDARALLAQTWLALREPMHGVAGRPLRLWST
>Mature_295_residues
MRHPDFPVPPQTDSFASWEASLRLAFARRGERTVLATCRHQGPLRVQKALYPEGEGVCHAVMLHPPAGIAGGDVLDINIE
LGADAHAVLTTPGATKWYKSLGRTATQRVAIRAETGARLDWVPQENIVFNQACPIIDLTLDLAPGATAIGWDATMLGRHA
AGESWAEGRIVLRTALRCNGQPLWIESAAFDAQSPVLNATTGMAGFHVVGTLWAVGEGATEALAESMAEHLPYNDDLRAG
VTCLTQDAPGLPNVLLLRVLARRPEDARALLAQTWLALREPMHGVAGRPLRLWST

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 31774; Mature: 31774

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPDFPVPPQTDSFASWEASLRLAFARRGERTVLATCRHQGPLRVQKALYPEGEGVCHA
CCCCCCCCCCCCCCCCCHHHHEEEEEHHCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEE
VMLHPPAGIAGGDVLDINIELGADAHAVLTTPGATKWYKSLGRTATQRVAIRAETGARLD
EEEECCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCHHHHEEEEEECCCCEEE
WVPQENIVFNQACPIIDLTLDLAPGATAIGWDATMLGRHAAGESWAEGRIVLRTALRCNG
CCCCCCEEECCCCCEEEEEEECCCCCCEECCCHHHHCCCCCCCCCCCCEEEEEEHHHCCC
QPLWIESAAFDAQSPVLNATTGMAGFHVVGTLWAVGEGATEALAESMAEHLPYNDDLRAG
CEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
VTCLTQDAPGLPNVLLLRVLARRPEDARALLAQTWLALREPMHGVAGRPLRLWST
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEECCC
>Mature Secondary Structure
MRHPDFPVPPQTDSFASWEASLRLAFARRGERTVLATCRHQGPLRVQKALYPEGEGVCHA
CCCCCCCCCCCCCCCCCHHHHEEEEEHHCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEE
VMLHPPAGIAGGDVLDINIELGADAHAVLTTPGATKWYKSLGRTATQRVAIRAETGARLD
EEEECCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCHHHHEEEEEECCCCEEE
WVPQENIVFNQACPIIDLTLDLAPGATAIGWDATMLGRHAAGESWAEGRIVLRTALRCNG
CCCCCCEEECCCCCEEEEEEECCCCCCEECCCHHHHCCCCCCCCCCCCEEEEEEHHHCCC
QPLWIESAAFDAQSPVLNATTGMAGFHVVGTLWAVGEGATEALAESMAEHLPYNDDLRAG
CEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
VTCLTQDAPGLPNVLLLRVLARRPEDARALLAQTWLALREPMHGVAGRPLRLWST
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]