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The map label for this gene is yaaA [C]

Identifier: 187929243

GI number: 187929243

Start: 2277793

End: 2278566

Strand: Reverse

Name: yaaA [C]

Synonym: Rpic_2164

Alternate gene names: 187929243

Gene position: 2278566-2277793 (Counterclockwise)

Preceding gene: 187929246

Following gene: 187929242

Centisome position: 57.79

GC content: 61.89

Gene sequence:

>774_bases
ATGATCATCGTCCTCTCGCCGGCCAAGTCGCTCGACTACGACACGCCGCCGCGCACCAAGACCCACACGCTGCCCGATTT
CATCGAGCGCTCCGCAGAACTCATTGACGTGCTTCGCAAGCTGTCGCCGGCCCAGATCGGCACGCTCATGCACATTTCCG
ACCCGTTGGCGGCGCTCAATGCCACGCGCTATGCCGATTGGTCGCCCGAATTCACTGCCGAAAACAGCAAGCAGGCCGCG
TTGGCCTTCGACGGCGATGTCTACGGCGGGCTCGATGCCAACTCGCTGGCGGTGGACGATCTGCAGTTCGCGCAGAAGCA
TCTGCGGATTCTGTCGGGGCTTTACGGCGTGCTGCGTCCGCTCGACTGGATGCAGCCGTATCGCCTGGAAATGGGCACGC
GCCTTGCCAATCCGCGCGGCAAGGATTTGTACGCCTTCTGGGGCGATGACGTGACGCTCGCGCTTAACGAGCTCTTCAAG
CAGGACGACGACGCCGTGCTCGTCAATCTCGCGTCGGAAGAGTATTTCAAGGTGGTGCGGCCCAAGGTGCTCAAGGCGCG
CATCGTCACGCCGGTGTTTGAAGACTGGAAGAACGGCCAGTACAAGATCATTTCGTTCTACGCAAAGCGTGCGCGCGGTC
TGATGGCGCGCTATGCGATCGAGCACCGTATCACCGATCCGCGCAAGCTCAAGGCGTTCGATGTCGACGGCTATGCCTTT
GCCGCTGCCGATTCCGACGACGAGCGCTGGGTCTTCCGCCGCAAGCTCACCTGA

Upstream 100 bases:

>100_bases
GTCCAGCACCACGCGCGGGGCCGGAGCCTGGGTGGAGTGGGCGAGGGCGGCAGCGTCTGCCATTCGATACAATTCCAGAC
TTGTGAACCGCGATTCTGAC

Downstream 100 bases:

>100_bases
TCGCAGGATCTGACATGACTGCCAATCAACCGCACATCTCCAGCGCGTTCGACAGCGGCGCCATCGAAATCGTCGATGCC
GCACGCGCCGATGCCATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MIIVLSPAKSLDYDTPPRTKTHTLPDFIERSAELIDVLRKLSPAQIGTLMHISDPLAALNATRYADWSPEFTAENSKQAA
LAFDGDVYGGLDANSLAVDDLQFAQKHLRILSGLYGVLRPLDWMQPYRLEMGTRLANPRGKDLYAFWGDDVTLALNELFK
QDDDAVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKNGQYKIISFYAKRARGLMARYAIEHRITDPRKLKAFDVDGYAF
AAADSDDERWVFRRKLT

Sequences:

>Translated_257_residues
MIIVLSPAKSLDYDTPPRTKTHTLPDFIERSAELIDVLRKLSPAQIGTLMHISDPLAALNATRYADWSPEFTAENSKQAA
LAFDGDVYGGLDANSLAVDDLQFAQKHLRILSGLYGVLRPLDWMQPYRLEMGTRLANPRGKDLYAFWGDDVTLALNELFK
QDDDAVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKNGQYKIISFYAKRARGLMARYAIEHRITDPRKLKAFDVDGYAF
AAADSDDERWVFRRKLT
>Mature_257_residues
MIIVLSPAKSLDYDTPPRTKTHTLPDFIERSAELIDVLRKLSPAQIGTLMHISDPLAALNATRYADWSPEFTAENSKQAA
LAFDGDVYGGLDANSLAVDDLQFAQKHLRILSGLYGVLRPLDWMQPYRLEMGTRLANPRGKDLYAFWGDDVTLALNELFK
QDDDAVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKNGQYKIISFYAKRARGLMARYAIEHRITDPRKLKAFDVDGYAF
AAADSDDERWVFRRKLT

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=254, Percent_Identity=58.6614173228346, Blast_Score=315, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2164_RALPJ (B2U7L1)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001899730.1
- GeneID:   6287816
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_2164
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29233; Mature: 29233

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYDTPPRTKTHTLPDFIERSAELIDVLRKLSPAQIGTLMHISDPLAALN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEECCCCHHHHH
ATRYADWSPEFTAENSKQAALAFDGDVYGGLDANSLAVDDLQFAQKHLRILSGLYGVLRP
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
LDWMQPYRLEMGTRLANPRGKDLYAFWGDDVTLALNELFKQDDDAVLVNLASEEYFKVVR
HHHCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
PKVLKARIVTPVFEDWKNGQYKIISFYAKRARGLMARYAIEHRITDPRKLKAFDVDGYAF
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
AAADSDDERWVFRRKLT
EECCCCCCHHHEEECCC
>Mature Secondary Structure
MIIVLSPAKSLDYDTPPRTKTHTLPDFIERSAELIDVLRKLSPAQIGTLMHISDPLAALN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEECCCCHHHHH
ATRYADWSPEFTAENSKQAALAFDGDVYGGLDANSLAVDDLQFAQKHLRILSGLYGVLRP
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
LDWMQPYRLEMGTRLANPRGKDLYAFWGDDVTLALNELFKQDDDAVLVNLASEEYFKVVR
HHHCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
PKVLKARIVTPVFEDWKNGQYKIISFYAKRARGLMARYAIEHRITDPRKLKAFDVDGYAF
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
AAADSDDERWVFRRKLT
EECCCCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA