Click here to switch to the map view.

The map label for this gene is yhbV [H]

Identifier: 187929191

GI number: 187929191

Start: 2225923

End: 2226807

Strand: Reverse

Name: yhbV [H]

Synonym: Rpic_2112

Alternate gene names: 187929191

Gene position: 2226807-2225923 (Counterclockwise)

Preceding gene: 187929192

Following gene: 187929190

Centisome position: 56.48

GC content: 64.75

Gene sequence:

>885_bases
ATGTCCTACGAAATTTCGCTTGGTCCGCTGCTGTACTACTGGCCGCGGCTACAGACGTTCGACTTTTACGCAGAAGTGGC
CGCTAGCCCTGTCGACATCGTCTATGTGGGCGAGACGGTTTGCAGCCGCCGCCACGAATTGCGCGCGGACGACTGGCTCG
ATATCGCCGCCATGCTGCGCGAGGCTGGCAAGTCGGTTGTGCTGTCGACGCGCACGCTCATCGAAACCAGTGCCGAGGCG
CAGGCGTTGCGCAAGCAGTGTCAGCAGGACGTCTGGATGGTCGAAGCCGGCGAGCTTGGCGCCGTGCGGTTGCTGAACGG
TCGGCCATTCGTTGCCGGGCCGCATTGCAACGCGTATCACGGCGCGACCCTGGCGTGGCTGGCTGGGCTGGGCGCGGTGC
GTGCGGTCATGCCGCTGGAGATGAGCCAGGCCACTCTGGCCGATCTGATGCGCGAGAAGCCGGCCGAGTTGGGGATCGAA
GCGATGGTGTGGGGACGCTTGCCGCTGGCATTTTCCGCACGCTGCTTTACGGCGCGGCACTTTCGCCTCAACAAGGACGA
CTGCGGATTCCGCTGCATCGAGCATCCCGATGGCCTGGCGGTGCGCACGCGCGAAGGGCAGGAGTTTCTCGCCATCAACG
GTATCCAGACGCAATCAGGGCAATGCCTCGACATTCTCGATCAGGCGCCCGCGCTGTCTGCGCTGGGTGTGAAGGTGTTG
CGTGTCAGCCCGCAATCGCGAGGCACGCTGGACGCCGTGGCAGCACTGGATGCCCTGCGCCTGGGCCTGCCTGTGCGGGA
CGTGCAGCCGCCGGAGGGCATTGGGCGCTGCAATGGCTACTGGCATGGGCAGTCCGGTATTGAATGGCTGGAGATGCCGC
AATGA

Upstream 100 bases:

>100_bases
TCGGTCAAGCCCGATTGGCAGGCCGCACTCGTGCGCCACGCAGAAGGCGCGCACGTCACGCAAGGTGCGTTTGATCGGCC
CTGGAAATAGAAGGCACATC

Downstream 100 bases:

>100_bases
CGCGCCTGCGCCCACCCGAAGTCTTCGTTCGCATGGCGCGCAGCCTACCGGTGCCGCTCACATCGTTCCCCTTTGTGATG
GGGCTCGATCTGGCCCGCCG

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRRHELRADDWLDIAAMLREAGKSVVLSTRTLIETSAEA
QALRKQCQQDVWMVEAGELGAVRLLNGRPFVAGPHCNAYHGATLAWLAGLGAVRAVMPLEMSQATLADLMREKPAELGIE
AMVWGRLPLAFSARCFTARHFRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQSGQCLDILDQAPALSALGVKVL
RVSPQSRGTLDAVAALDALRLGLPVRDVQPPEGIGRCNGYWHGQSGIEWLEMPQ

Sequences:

>Translated_294_residues
MSYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRRHELRADDWLDIAAMLREAGKSVVLSTRTLIETSAEA
QALRKQCQQDVWMVEAGELGAVRLLNGRPFVAGPHCNAYHGATLAWLAGLGAVRAVMPLEMSQATLADLMREKPAELGIE
AMVWGRLPLAFSARCFTARHFRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQSGQCLDILDQAPALSALGVKVL
RVSPQSRGTLDAVAALDALRLGLPVRDVQPPEGIGRCNGYWHGQSGIEWLEMPQ
>Mature_293_residues
SYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRRHELRADDWLDIAAMLREAGKSVVLSTRTLIETSAEAQ
ALRKQCQQDVWMVEAGELGAVRLLNGRPFVAGPHCNAYHGATLAWLAGLGAVRAVMPLEMSQATLADLMREKPAELGIEA
MVWGRLPLAFSARCFTARHFRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQSGQCLDILDQAPALSALGVKVLR
VSPQSRGTLDAVAALDALRLGLPVRDVQPPEGIGRCNGYWHGQSGIEWLEMPQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=293, Percent_Identity=39.9317406143345, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32347; Mature: 32215

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRRHELRADDWLDIAAMLR
CCEEECCCCCEEECCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHH
EAGKSVVLSTRTLIETSAEAQALRKQCQQDVWMVEAGELGAVRLLNGRPFVAGPHCNAYH
HCCCEEEEEHHHHHHCCHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCEEECCCCCCCC
GATLAWLAGLGAVRAVMPLEMSQATLADLMREKPAELGIEAMVWGRLPLAFSARCFTARH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCEEEEECCCCHHHHHHEEEEEE
FRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQSGQCLDILDQAPALSALGVKVL
EEECCCCCCEEEEECCCCCEEEECCCCEEEEEECEECCCCCHHHHHHCCCCHHHHCEEEE
RVSPQSRGTLDAVAALDALRLGLPVRDVQPPEGIGRCNGYWHGQSGIEWLEMPQ
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
SYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRRHELRADDWLDIAAMLR
CEEECCCCCEEECCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHH
EAGKSVVLSTRTLIETSAEAQALRKQCQQDVWMVEAGELGAVRLLNGRPFVAGPHCNAYH
HCCCEEEEEHHHHHHCCHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCEEECCCCCCCC
GATLAWLAGLGAVRAVMPLEMSQATLADLMREKPAELGIEAMVWGRLPLAFSARCFTARH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCEEEEECCCCHHHHHHEEEEEE
FRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQSGQCLDILDQAPALSALGVKVL
EEECCCCCCEEEEECCCCCEEEECCCCEEEEEECEECCCCCHHHHHHCCCCHHHHCEEEE
RVSPQSRGTLDAVAALDALRLGLPVRDVQPPEGIGRCNGYWHGQSGIEWLEMPQ
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]