| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929167
Identifier: 187929167
GI number: 187929167
Start: 2197991
End: 2199871
Strand: Direct
Name: 187929167
Synonym: Rpic_2088
Alternate gene names: NA
Gene position: 2197991-2199871 (Clockwise)
Preceding gene: 187929166
Following gene: 187929168
Centisome position: 55.75
GC content: 69.86
Gene sequence:
>1881_bases ATGGGAACCTTCGCGCTCAGCGTGACGCCGGCGGATGACCTGATCGACGTATCGCGCGGCATCGTCGTGACGGGGCTCGC GCCTGGCACACAAGTCGGCATCGTCGCGCAAACGCGTCGCGGCAATGATGTGCTGTGGCACAGCCGCGCCGCGTTCGTCG CCGATGCGCAAGGCACCGTGGACCTGACGCGCGACGCGCCCGTCTCCGGCGACTACGCCGGCGTCAGCGCGATGGGCATC GTCTGGAGCCAGCGCCCGGAAGACGGCAAGGCACGCGAGGTGTTTCCACAGCCAGTCGCAGAGCCGTTGACGACCACGCT GACGGCCACGGCCAACGGCGAGTCGGTCCACGCGAGCTTCGTGCAACGGCTGGCCGCGCCGGGGGTGACGCGCCACGATG TGCGCGACGATGGTCTGGTCGGTACGCTATACCTGCCCGATCCGTATGCGCACCCGGGCCCGCGCCCGGCCGTGCTCATC CTCAACGGCTCGGGCGGCGGCATCAACGAGCCGCGCGCGGCGCTGTATGCCTCGCACGGTTATGCCGCCTTTGCGCTGGC GTACTTCAAGGCGCCGGGGCTGCCGGACTACATCTCGAATACGCCGCTGGAATATTTCGAGCGCGCGCTTGCCTGGCTGC GCAAACGCGTGGAGCCGCTGCACGACTTCGTTGCCGTGAGCGGCCAGTCGCGCGGGGGTGAACTGGCATTGCTGCTGGGC GCGACATTCCCTGAGGCGGTATCTGCGGTCATCGGTTACGTGCCGGGCGCCGTCGTGCACAGCGGGCAGAACGCCGCCGA CCCTGCTGTGGGCCGCGAAGGCCCGACGTGGCTGTATCGCGGTCAGCCGCTGCCGCATCTGTGGGAAGGCAACCGCACCG CGAGCTGGGCACCGTTTGACGAAGGCCCTGCGCCGCATCGGCATGAACGCGCCATCCGCACCGCGCTGCAGGATACCGAT GCCGTGGCACGCGCGCGCATCCGCATCGAACGCGCGCGGGGGCCGGTGCTGCTGCTCTCCGCCACCGATGACGGCTCGTG GCCCTCGAGCGACTACTCGCGCATGGTGACGACCAAATTGGCCGAGGTACGCCACCCCTACCCCGTCCAACATTTCGATT ACGAAGGCGCGGGTCACGCCATCGTCTTCCCATACGTGCCGACCACGCAGCTCGTCTATGCGCACCCGGTGTCGGGCCGC ATCAGCACCGGGGGCGGCGAGCCGCGCGCCAACGCCCGCGCCGACGCCCAGTCATGGGCAGCAGTGCTTCGCTTCCTCGC CAGCGCGGTAGCCGCGCGCGGCGCGTCCGTACCCGATTCCCGGAGCCTTTCATCAATGGATTTCACGCCCGCACACGATG TGGCCGACCAGGTTGCCGGCCTGGACGACGGCAGCCCCACGCATGCGCTGCGCCATGCCCGCGAAAAGGTGGCAACGGCC ACGCAGGGCAGCTACAACGCATTGTTCGACGCAGGCCTGCCCGGCCTGACGTTGGGCGAACGCCTGCTCGTCGCGCTCTA TGCCTGCCGCCTCACCCCGGCGCCCGAACTGGCCGAACACTACCGCGCGCGCCTCGCGAGCACGCCGGTCGACGCAGATG CGTTGCAAGCCGTCGACCACGGCGATATCGACACGCTGACCGACGCACGCCTGCGCGCCATCCTCACCTTCACGCGCACG CTCGTCGAGCGCCCCATCGAGGGCGACCGCGATGCGCTGTTGCGCCTGCCCGCCGCGGGCCTCGCCACGGCCGACGTCGT GACGCTCGCGCAGCTCATCGCTTTCCTGTCGTATCAGACGCGGCTCGTCGCCGGCTTGCGCGCCCTCCGCGAAGCCGCCG GCAGCGGCAGCGCCACCGCTTCCACGGAGACCGCAGCATGA
Upstream 100 bases:
>100_bases ACCAGAACGTGTGGGCCGCCAAAAAAGGCCTGAAGGTGACGCCGATGACGAGCGATCGCACCGCGGCCCAGATGGTCACC AAGGACGGCAAGTAAGCGCC
Downstream 100 bases:
>100_bases CCGAGATCATCCGCGCACACGGCTTCACCAACGAATCGCTTGAATGGCAAGCGTGGCTGGATGTGGTCGACCTCGACCGC GCCACGCCCGAGCAGATCGC
Product: Bile acid-CoA:amino acid N-acyltransferase
Products: NA
Alternate protein names: Palmitoyl-CoA Hydrolase; BAAT/Acyl-CoA Thioester Hydrolase; Acyl-CoA Thioesterase; Thioesterase; BAAT/Acyl-CoA Thioester Hydrolase-Like Protein; Acyl Co A Thioester Hydrolase Protein; Bile Acid-CoAAmino Acid N-Acyltransferase; BAAT/Acyl-CoA Thioester Hydrolase Family; Peroxidase-Related; Carboxymuconolactone Decarboxylase Family; Dienelactone Hydrolase-Like; Acyl CoA Thioesterase; Membrane Associated Protein; Alpha/Beta Fold Family Hydrolase; Dienelactone Hydrolase Family Protein; Peroxidase; Long-Chain Fatty-Acyl-CoA Hydrolase
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MGTFALSVTPADDLIDVSRGIVVTGLAPGTQVGIVAQTRRGNDVLWHSRAAFVADAQGTVDLTRDAPVSGDYAGVSAMGI VWSQRPEDGKAREVFPQPVAEPLTTTLTATANGESVHASFVQRLAAPGVTRHDVRDDGLVGTLYLPDPYAHPGPRPAVLI LNGSGGGINEPRAALYASHGYAAFALAYFKAPGLPDYISNTPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLG ATFPEAVSAVIGYVPGAVVHSGQNAADPAVGREGPTWLYRGQPLPHLWEGNRTASWAPFDEGPAPHRHERAIRTALQDTD AVARARIRIERARGPVLLLSATDDGSWPSSDYSRMVTTKLAEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGR ISTGGGEPRANARADAQSWAAVLRFLASAVAARGASVPDSRSLSSMDFTPAHDVADQVAGLDDGSPTHALRHAREKVATA TQGSYNALFDAGLPGLTLGERLLVALYACRLTPAPELAEHYRARLASTPVDADALQAVDHGDIDTLTDARLRAILTFTRT LVERPIEGDRDALLRLPAAGLATADVVTLAQLIAFLSYQTRLVAGLRALREAAGSGSATASTETAA
Sequences:
>Translated_626_residues MGTFALSVTPADDLIDVSRGIVVTGLAPGTQVGIVAQTRRGNDVLWHSRAAFVADAQGTVDLTRDAPVSGDYAGVSAMGI VWSQRPEDGKAREVFPQPVAEPLTTTLTATANGESVHASFVQRLAAPGVTRHDVRDDGLVGTLYLPDPYAHPGPRPAVLI LNGSGGGINEPRAALYASHGYAAFALAYFKAPGLPDYISNTPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLG ATFPEAVSAVIGYVPGAVVHSGQNAADPAVGREGPTWLYRGQPLPHLWEGNRTASWAPFDEGPAPHRHERAIRTALQDTD AVARARIRIERARGPVLLLSATDDGSWPSSDYSRMVTTKLAEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGR ISTGGGEPRANARADAQSWAAVLRFLASAVAARGASVPDSRSLSSMDFTPAHDVADQVAGLDDGSPTHALRHAREKVATA TQGSYNALFDAGLPGLTLGERLLVALYACRLTPAPELAEHYRARLASTPVDADALQAVDHGDIDTLTDARLRAILTFTRT LVERPIEGDRDALLRLPAAGLATADVVTLAQLIAFLSYQTRLVAGLRALREAAGSGSATASTETAA >Mature_625_residues GTFALSVTPADDLIDVSRGIVVTGLAPGTQVGIVAQTRRGNDVLWHSRAAFVADAQGTVDLTRDAPVSGDYAGVSAMGIV WSQRPEDGKAREVFPQPVAEPLTTTLTATANGESVHASFVQRLAAPGVTRHDVRDDGLVGTLYLPDPYAHPGPRPAVLIL NGSGGGINEPRAALYASHGYAAFALAYFKAPGLPDYISNTPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGA TFPEAVSAVIGYVPGAVVHSGQNAADPAVGREGPTWLYRGQPLPHLWEGNRTASWAPFDEGPAPHRHERAIRTALQDTDA VARARIRIERARGPVLLLSATDDGSWPSSDYSRMVTTKLAEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRI STGGGEPRANARADAQSWAAVLRFLASAVAARGASVPDSRSLSSMDFTPAHDVADQVAGLDDGSPTHALRHAREKVATAT QGSYNALFDAGLPGLTLGERLLVALYACRLTPAPELAEHYRARLASTPVDADALQAVDHGDIDTLTDARLRAILTFTRTL VERPIEGDRDALLRLPAAGLATADVVTLAQLIAFLSYQTRLVAGLRALREAAGSGSATASTETAA
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI81230485, Length=426, Percent_Identity=31.2206572769953, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI148727286, Length=426, Percent_Identity=30.9859154929577, Blast_Score=153, Evalue=6e-37, Organism=Homo sapiens, GI187761341, Length=426, Percent_Identity=29.1079812206573, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI189083866, Length=453, Percent_Identity=29.3598233995585, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI4502351, Length=453, Percent_Identity=29.3598233995585, Blast_Score=115, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71992104, Length=430, Percent_Identity=25.5813953488372, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71993180, Length=455, Percent_Identity=24.8351648351648, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI212632908, Length=436, Percent_Identity=23.394495412844, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17508861, Length=383, Percent_Identity=25.5874673629243, Blast_Score=89, Evalue=9e-18, Organism=Caenorhabditis elegans, GI212632910, Length=306, Percent_Identity=23.8562091503268, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66315; Mature: 66184
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTFALSVTPADDLIDVSRGIVVTGLAPGTQVGIVAQTRRGNDVLWHSRAAFVADAQGTV CCEEEEEECCCHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEEECCCCCE DLTRDAPVSGDYAGVSAMGIVWSQRPEDGKAREVFPQPVAEPLTTTLTATANGESVHASF EECCCCCCCCCCCCHHHEEEEECCCCCCCCHHHCCCCHHHHHHHEEEEECCCCCHHHHHH VQRLAAPGVTRHDVRDDGLVGTLYLPDPYAHPGPRPAVLILNGSGGGINEPRAALYASHG HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEECCC YAAFALAYFKAPGLPDYISNTPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLG HHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ATFPEAVSAVIGYVPGAVVHSGQNAADPAVGREGPTWLYRGQPLPHLWEGNRTASWAPFD CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCC EGPAPHRHERAIRTALQDTDAVARARIRIERARGPVLLLSATDDGSWPSSDYSRMVTTKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCHHHHHHHHHHH AEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRISTGGGEPRANARADAQSWA HHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHH AVLRFLASAVAARGASVPDSRSLSSMDFTPAHDVADQVAGLDDGSPTHALRHAREKVATA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TQGSYNALFDAGLPGLTLGERLLVALYACRLTPAPELAEHYRARLASTPVDADALQAVDH CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCC GDIDTLTDARLRAILTFTRTLVERPIEGDRDALLRLPAAGLATADVVTLAQLIAFLSYQT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH RLVAGLRALREAAGSGSATASTETAA HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GTFALSVTPADDLIDVSRGIVVTGLAPGTQVGIVAQTRRGNDVLWHSRAAFVADAQGTV CEEEEEECCCHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEEECCCCCE DLTRDAPVSGDYAGVSAMGIVWSQRPEDGKAREVFPQPVAEPLTTTLTATANGESVHASF EECCCCCCCCCCCCHHHEEEEECCCCCCCCHHHCCCCHHHHHHHEEEEECCCCCHHHHHH VQRLAAPGVTRHDVRDDGLVGTLYLPDPYAHPGPRPAVLILNGSGGGINEPRAALYASHG HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEECCC YAAFALAYFKAPGLPDYISNTPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLG HHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ATFPEAVSAVIGYVPGAVVHSGQNAADPAVGREGPTWLYRGQPLPHLWEGNRTASWAPFD CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCC EGPAPHRHERAIRTALQDTDAVARARIRIERARGPVLLLSATDDGSWPSSDYSRMVTTKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCHHHHHHHHHHH AEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRISTGGGEPRANARADAQSWA HHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHH AVLRFLASAVAARGASVPDSRSLSSMDFTPAHDVADQVAGLDDGSPTHALRHAREKVATA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TQGSYNALFDAGLPGLTLGERLLVALYACRLTPAPELAEHYRARLASTPVDADALQAVDH CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCC GDIDTLTDARLRAILTFTRTLVERPIEGDRDALLRLPAAGLATADVVTLAQLIAFLSYQT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH RLVAGLRALREAAGSGSATASTETAA HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA