Click here to switch to the map view.

The map label for this gene is 187929159

Identifier: 187929159

GI number: 187929159

Start: 2188677

End: 2189828

Strand: Direct

Name: 187929159

Synonym: Rpic_2080

Alternate gene names: NA

Gene position: 2188677-2189828 (Clockwise)

Preceding gene: 187929158

Following gene: 187929160

Centisome position: 55.51

GC content: 64.93

Gene sequence:

>1152_bases
ATGATAGGTTGCAATGCCGCCTTGCAGCGCGCCATCGGGTGCGCATGGCTGTCGGGGCTGTTGCTGGCGTCGGGTCCGGC
GATGGCCGAGCCAGGCATCACCGATGGCAAGATCGTCATCGGACAGACCGCGGGCTTCACCGGGCCCGCCGGCGAGCAAG
TCCAGGAGATGACGCAAGGAGCCAGGCTCTACCTCGATGCGGTGAACCGCGCTGGCGGCGTGAATGGACGCAAGATCGAA
CTGATCTCGGAAGACGACGGCTTTGATGCGGCCGCCTCCAAAAAACACGCACATGCGCTGCTGGTCGACAAACAGGTCTT
CGCCCTCTTCCTGCCGCGCGGCACGCCAAACACCGAAGCGATCATGACCGAGGCTCGTCCGCTTGGCGCCCCGGTGGTGG
CGCCGTCCACCGGTGCTTCAACCTTCTTCGATCAGCCCGACCCGCTGCTGTTCGTGGTGCGCGCGAAATACCAGGCCGAG
ATTGCCGAGCTGGTGCATTACTTCGACACGCTCGGCTTGCGCCGCCTGGCGCTCGTCAACGTGAATGACACCTTCGGCAA
GGACACCGAGATCGGCTTCAGCAACGCCACGAAAAAGCTGCCGCCCGACGCGCACAGCATCTTCACTGTCGACCGCCTGA
AACCGGATATCGCCAAGGCCACGGCAGACGTGGGCAAGTTCGCCCCGCAAGCGGTCATCCTGGCCTGCCCAGCCACGACC
GCGCGCGCAATGATCGAGGCGCTCAACAAGCAAGGCACGGTGACGCAGATTGCCGCGCTTTCCAACAACGCCGGCCTGGC
GTTTGCGAAATCGCTCGGGGCGCTGGGGCGCGGTGTCGTGATCTCGCAGGTGATGCCGTCGCCGGTGCGTTCGACTTCGT
TGCTGGGACGGGAGCTGGCGTCCAGCGCGAAGTCTGCCGGGGTGACGCCGTCGTACGCCATGATGGAAGGCTACGCAGCC
GCGCGCGTGCTGGTCGAAGGGCTCAAGCGCGCGGGCAAGTCACCCACGCGGGCCAGCTTTGTCTCGGGGCTGGAATCAGC
CGGCACGATCGACCTTGGCGGGCTGGAAGTCTGCTACGGCCCGAACGTTCGCAAGGGATCGGACTATGTCGAGCTGACGG
TGATCGGGCCAAACGGCACCTTCGTCAAATAG

Upstream 100 bases:

>100_bases
CGCCTCGGGGCTTCTCCGCTAGCATCGTCCCGCCGATGTTGCGATGGGTTTCGCCGTCTCGGCACACAAAAAACAATCAC
CCAGAAAAAAGGGGGGAGAC

Downstream 100 bases:

>100_bases
ATCCGCACGGCGGTGTACCCTGCCTCGGCAATGGTTGCACCGCAGGACATAGCGGTTGCCAGCGCAAAACGCATGAGTAC
ATAAGAAAATACTATTTTGA

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems; Branched-Chain Amino Acid ABC Transporter; Lipoprotein; Signal Peptide; Serine/Threonine Protein Kinase; ABC Branched-Chain Amino Acid Transporter

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MIGCNAALQRAIGCAWLSGLLLASGPAMAEPGITDGKIVIGQTAGFTGPAGEQVQEMTQGARLYLDAVNRAGGVNGRKIE
LISEDDGFDAAASKKHAHALLVDKQVFALFLPRGTPNTEAIMTEARPLGAPVVAPSTGASTFFDQPDPLLFVVRAKYQAE
IAELVHYFDTLGLRRLALVNVNDTFGKDTEIGFSNATKKLPPDAHSIFTVDRLKPDIAKATADVGKFAPQAVILACPATT
ARAMIEALNKQGTVTQIAALSNNAGLAFAKSLGALGRGVVISQVMPSPVRSTSLLGRELASSAKSAGVTPSYAMMEGYAA
ARVLVEGLKRAGKSPTRASFVSGLESAGTIDLGGLEVCYGPNVRKGSDYVELTVIGPNGTFVK

Sequences:

>Translated_383_residues
MIGCNAALQRAIGCAWLSGLLLASGPAMAEPGITDGKIVIGQTAGFTGPAGEQVQEMTQGARLYLDAVNRAGGVNGRKIE
LISEDDGFDAAASKKHAHALLVDKQVFALFLPRGTPNTEAIMTEARPLGAPVVAPSTGASTFFDQPDPLLFVVRAKYQAE
IAELVHYFDTLGLRRLALVNVNDTFGKDTEIGFSNATKKLPPDAHSIFTVDRLKPDIAKATADVGKFAPQAVILACPATT
ARAMIEALNKQGTVTQIAALSNNAGLAFAKSLGALGRGVVISQVMPSPVRSTSLLGRELASSAKSAGVTPSYAMMEGYAA
ARVLVEGLKRAGKSPTRASFVSGLESAGTIDLGGLEVCYGPNVRKGSDYVELTVIGPNGTFVK
>Mature_383_residues
MIGCNAALQRAIGCAWLSGLLLASGPAMAEPGITDGKIVIGQTAGFTGPAGEQVQEMTQGARLYLDAVNRAGGVNGRKIE
LISEDDGFDAAASKKHAHALLVDKQVFALFLPRGTPNTEAIMTEARPLGAPVVAPSTGASTFFDQPDPLLFVVRAKYQAE
IAELVHYFDTLGLRRLALVNVNDTFGKDTEIGFSNATKKLPPDAHSIFTVDRLKPDIAKATADVGKFAPQAVILACPATT
ARAMIEALNKQGTVTQIAALSNNAGLAFAKSLGALGRGVVISQVMPSPVRSTSLLGRELASSAKSAGVTPSYAMMEGYAA
ARVLVEGLKRAGKSPTRASFVSGLESAGTIDLGGLEVCYGPNVRKGSDYVELTVIGPNGTFVK

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39829; Mature: 39829

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGCNAALQRAIGCAWLSGLLLASGPAMAEPGITDGKIVIGQTAGFTGPAGEQVQEMTQG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
ARLYLDAVNRAGGVNGRKIELISEDDGFDAAASKKHAHALLVDKQVFALFLPRGTPNTEA
HHEEEHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEHHEEEEEEECCCCCCCHH
IMTEARPLGAPVVAPSTGASTFFDQPDPLLFVVRAKYQAEIAELVHYFDTLGLRRLALVN
EEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE
VNDTFGKDTEIGFSNATKKLPPDAHSIFTVDRLKPDIAKATADVGKFAPQAVILACPATT
CCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCHHHHHHHHHHHCCCCEEEEECCCHH
ARAMIEALNKQGTVTQIAALSNNAGLAFAKSLGALGRGVVISQVMPSPVRSTSLLGRELA
HHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEHHHHCCCCCHHHHHHHHHHH
SSAKSAGVTPSYAMMEGYAAARVLVEGLKRAGKSPTRASFVSGLESAGTIDLGGLEVCYG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCEEEEEC
PNVRKGSDYVELTVIGPNGTFVK
CCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MIGCNAALQRAIGCAWLSGLLLASGPAMAEPGITDGKIVIGQTAGFTGPAGEQVQEMTQG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
ARLYLDAVNRAGGVNGRKIELISEDDGFDAAASKKHAHALLVDKQVFALFLPRGTPNTEA
HHEEEHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEHHEEEEEEECCCCCCCHH
IMTEARPLGAPVVAPSTGASTFFDQPDPLLFVVRAKYQAEIAELVHYFDTLGLRRLALVN
EEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE
VNDTFGKDTEIGFSNATKKLPPDAHSIFTVDRLKPDIAKATADVGKFAPQAVILACPATT
CCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCHHHHHHHHHHHCCCCEEEEECCCHH
ARAMIEALNKQGTVTQIAALSNNAGLAFAKSLGALGRGVVISQVMPSPVRSTSLLGRELA
HHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEHHHHCCCCCHHHHHHHHHHH
SSAKSAGVTPSYAMMEGYAAARVLVEGLKRAGKSPTRASFVSGLESAGTIDLGGLEVCYG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCEEEEEC
PNVRKGSDYVELTVIGPNGTFVK
CCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA