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The map label for this gene is yhbY [C]

Identifier: 187929110

GI number: 187929110

Start: 2138711

End: 2139211

Strand: Direct

Name: yhbY [C]

Synonym: Rpic_2031

Alternate gene names: 187929110

Gene position: 2138711-2139211 (Clockwise)

Preceding gene: 187929098

Following gene: 187929119

Centisome position: 54.25

GC content: 66.47

Gene sequence:

>501_bases
ATGCCCGCCCTTATCCTCACCCCTGCCCAACGATCGGAACTGCGCTCCGAAGCGCACGCGTTGAACCCGGTCGTCATCAT
CGGTGCGGAGGGTCTGACCAAGGCCGTTCTGGCCGAAATCGACCGCTCGCTGGCGGCACACGGGCTGATCAAGATTCGCG
TCTTCGGCGATGACCGCGAAGCACGCATCGAACTCTACGACACCATCTGCGCCCGCCTGCAAGCCGCCCCCGTACAGCAC
ATCGGCAAGCTGCTGGTGATCTGGCGCGAAGGCCCGGCGTACCTGAAGGAAAACCAGCCGCGCGATCTCAAGCCGCCGCG
CAAGACGACCGTGGGCGCCGGTCCGCGCTCGGTCACCGTGCGCAAGCCGAACCCGAACAGCGCACGCCGCCCGAAGCCCG
TCCGCCTGAGCGTGCTCGGCAACGAACGTGTCACGGCCGGCGGCAACGTCAAGCGCGCCAAGCCGCGTCAAACCAGCCAG
AAAAAGAAGGCGCTGTCCTGA

Upstream 100 bases:

>100_bases
TTGCAATTTCGCCCGAATGTAGCGCCAAACATGGCGGCCAGGACTGGTTTTGGCGGATAATACGCGCCGTTTGTCTCTTT
GCGCGATCCCGCGCTTATTT

Downstream 100 bases:

>100_bases
TCCAATTCGGGGCTGCACACAAAACGACCGGCTTTTCAGCCGGTCTTTTTTTGGCCTTCAGGCGGCTTGTCGAACATCGG
CTGCCTTCCAGATCAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPALILTPAQRSELRSEAHALNPVVIIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQH
IGKLLVIWREGPAYLKENQPRDLKPPRKTTVGAGPRSVTVRKPNPNSARRPKPVRLSVLGNERVTAGGNVKRAKPRQTSQ
KKKALS

Sequences:

>Translated_166_residues
MPALILTPAQRSELRSEAHALNPVVIIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQH
IGKLLVIWREGPAYLKENQPRDLKPPRKTTVGAGPRSVTVRKPNPNSARRPKPVRLSVLGNERVTAGGNVKRAKPRQTSQ
KKKALS
>Mature_165_residues
PALILTPAQRSELRSEAHALNPVVIIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQHI
GKLLVIWREGPAYLKENQPRDLKPPRKTTVGAGPRSVTVRKPNPNSARRPKPVRLSVLGNERVTAGGNVKRAKPRQTSQK
KKALS

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=84, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 18179; Mature: 18048

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALILTPAQRSELRSEAHALNPVVIIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDRE
CCEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
ARIELYDTICARLQAAPVQHIGKLLVIWREGPAYLKENQPRDLKPPRKTTVGAGPRSVTV
HHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
RKPNPNSARRPKPVRLSVLGNERVTAGGNVKRAKPRQTSQKKKALS
ECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
PALILTPAQRSELRSEAHALNPVVIIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDRE
CEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
ARIELYDTICARLQAAPVQHIGKLLVIWREGPAYLKENQPRDLKPPRKTTVGAGPRSVTV
HHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
RKPNPNSARRPKPVRLSVLGNERVTAGGNVKRAKPRQTSQKKKALS
ECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]