| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929003
Identifier: 187929003
GI number: 187929003
Start: 2028793
End: 2029557
Strand: Reverse
Name: 187929003
Synonym: Rpic_1923
Alternate gene names: NA
Gene position: 2029557-2028793 (Counterclockwise)
Preceding gene: 187929006
Following gene: 187929002
Centisome position: 51.48
GC content: 66.14
Gene sequence:
>765_bases ATGCGCGTCATGCCTACGCTCCTGTTTTCTGCCCGTCGCCGCGCTGCTGCGCGCCGCGCTTCCCAGCTGGTTCTGCCGGC GTCCGTGCTCAGTGTCGCGCTGCTTGCCGCGCCCGCATGGAGTCAGTCTCAGCCCGCCTCTGCGCCGACTGCGGCGGTGC CCGCCACGCAGCCCGATTTCGGCGCCGAGCACGATCGCATCGCCAGCGCCAAATCCTGGGCCGAATACCGGTACGCCCAG GCCGAGCGGGCCTGCTACGACAAATTCCTCGTCACGCGCTGCATCGACAAGGCCAAGGATGTGCGTCGCACGGAACTCCA CTCCATCCGCGAACGCGAGTTGGCATTAGACGAAGCCGAGCGCGCCGACCGCGCTGCCCGTCGCGACCAGGAGCGTGCCA TCCGCGAGGCCCAGTACAACGCCGAACGGCCCCAGCGCGAAGCTGCCGAGCAGAAGAATCGCACCGATTTTGCGAGCAAG CAGGAGCAGCAGCGGCTGAATGAGGCGCAGCGCCAGGCCGCAGCGCCGCAGCGCGCTGCCAACGCGCAGGCCGCTGCCAA AAAGCAGACCGATTACGACGCTAAGCTGAAAGCCGCGCAGGAGCAGGGCGCAGCCAATGCCGCCAAGCGTGCGGAAAGCG CCAAGCAATTCCAGGAAAAGCAGCAAGACGCCGCCAAGCGCCAGAAGGAATTGGAAGAGCGCCGCGAACAAGCCAAGCGC CGAAACCAGCAAAACCAGAACAACACCAGTCCGCTGGGGTTCTAA
Upstream 100 bases:
>100_bases GAGTGCGATGGAAAGCCGCGCATTTTGCCACAACGCGAACCCTGTTCCTGAGCTGAAATCCGTGGCCGCGCGGCGTTTGC CGCACAGGCGCGGTGATAAA
Downstream 100 bases:
>100_bases ACTTCAGCCAAGGCCGGGTTTCCGGAGGAGAGCGATGGACAGCGATCTGAATACGATCTCGCGTCGCATCATTGAATTGC AGATCGAGCACCGCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRVMPTLLFSARRRAAARRASQLVLPASVLSVALLAAPAWSQSQPASAPTAAVPATQPDFGAEHDRIASAKSWAEYRYAQ AERACYDKFLVTRCIDKAKDVRRTELHSIRERELALDEAERADRAARRDQERAIREAQYNAERPQREAAEQKNRTDFASK QEQQRLNEAQRQAAAPQRAANAQAAAKKQTDYDAKLKAAQEQGAANAAKRAESAKQFQEKQQDAAKRQKELEERREQAKR RNQQNQNNTSPLGF
Sequences:
>Translated_254_residues MRVMPTLLFSARRRAAARRASQLVLPASVLSVALLAAPAWSQSQPASAPTAAVPATQPDFGAEHDRIASAKSWAEYRYAQ AERACYDKFLVTRCIDKAKDVRRTELHSIRERELALDEAERADRAARRDQERAIREAQYNAERPQREAAEQKNRTDFASK QEQQRLNEAQRQAAAPQRAANAQAAAKKQTDYDAKLKAAQEQGAANAAKRAESAKQFQEKQQDAAKRQKELEERREQAKR RNQQNQNNTSPLGF >Mature_254_residues MRVMPTLLFSARRRAAARRASQLVLPASVLSVALLAAPAWSQSQPASAPTAAVPATQPDFGAEHDRIASAKSWAEYRYAQ AERACYDKFLVTRCIDKAKDVRRTELHSIRERELALDEAERADRAARRDQERAIREAQYNAERPQREAAEQKNRTDFASK QEQQRLNEAQRQAAAPQRAANAQAAAKKQTDYDAKLKAAQEQGAANAAKRAESAKQFQEKQQDAAKRQKELEERREQAKR RNQQNQNNTSPLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28625; Mature: 28625
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMPTLLFSARRRAAARRASQLVLPASVLSVALLAAPAWSQSQPASAPTAAVPATQPDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GAEHDRIASAKSWAEYRYAQAERACYDKFLVTRCIDKAKDVRRTELHSIRERELALDEAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADRAARRDQERAIREAQYNAERPQREAAEQKNRTDFASKQEQQRLNEAQRQAAAPQRAA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH NAQAAAKKQTDYDAKLKAAQEQGAANAAKRAESAKQFQEKQQDAAKRQKELEERREQAKR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNQQNQNNTSPLGF HHHHCCCCCCCCCC >Mature Secondary Structure MRVMPTLLFSARRRAAARRASQLVLPASVLSVALLAAPAWSQSQPASAPTAAVPATQPDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GAEHDRIASAKSWAEYRYAQAERACYDKFLVTRCIDKAKDVRRTELHSIRERELALDEAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADRAARRDQERAIREAQYNAERPQREAAEQKNRTDFASKQEQQRLNEAQRQAAAPQRAA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH NAQAAAKKQTDYDAKLKAAQEQGAANAAKRAESAKQFQEKQQDAAKRQKELEERREQAKR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNQQNQNNTSPLGF HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA