| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928976
Identifier: 187928976
GI number: 187928976
Start: 1998060
End: 1999685
Strand: Reverse
Name: 187928976
Synonym: Rpic_1896
Alternate gene names: NA
Gene position: 1999685-1998060 (Counterclockwise)
Preceding gene: 187928977
Following gene: 187928975
Centisome position: 50.72
GC content: 63.9
Gene sequence:
>1626_bases ATGCGAATCCGTAGCACCACGATCTTCTTGGCGCTGGCAGCCGCCGGCGCGCTTTCACTGCAGACCGCGCATGCGGCAAC GCAGGACAAGCCGCATCGCCACACCGCGCAAGCCAAGGCGCCAGCCGCCGACGAGCAGCGCCTGGACCGCGACGATGCAC GCTATTTCCTCGCCCGCATCGGCTTTGCGCCTTCCGAGAGCGAACTCGACGCCTACGCCGGACTCACACACCGCGAAGCC GTCGACCGCGTCCTTGCCCAGACGGGCACCGTTGCCACGCAAGCGCCCCCAGCGTGGGTGAACGAGCCGATCGTCCCCTA CAACAAGCTACCCGACGAAGACGCCCGCAAGACGGCGCGCCAGAAGAATGCCGCGCACGAGCTGGAATTGCGTGCCTGGT GGATGGGCGAGATGATCAAGACGCCGTCGCCGCTGACAGAGCGCATGACGCTGTTCTGGCACAACCATTTCGTTTCCAGT TCGCAGAAGGTGCCGTTCGCGCAATTGATGTATCGGCAGAACGTGCTGCTGCGCCAGAACGCGGTGGGCAACTTCGGCAC GATGCTGCACGCCATCGGCAAAGACCCGGCGATGCTGATCTATCTGGATGGCGCCGAGAGCCGCAAGGGCAAGCCGAATG AGAATTTCGCGCGCGAGGTGATGGAGCTTTTCACGCTGGGTGAAGGCCATTACACCGAACAGGACATCAAGGAAGCCGCG CGCACCTACACAGGCTGGAGCATCGACCGCGAGCACGATTTCACCTACATCTGGCGGCCGCAGATACACGACACGGGCGT GAAGACTGTGTTTGGCCAGAGCGGCGATTACGACGGCGACCAGATGCTCGACATCCTGCTGTCTCGCCCAGAGACGGCAA ACTTCATCGTCACCAAGCTCTGGCGCGAGTTTGTTTCGCCTGACGTGGACGCGGCCCAGGCGCTGCGCGTGGCCGATGCG TTCCGGGCAAGTGGCTATGACATCAAGGTGGCGTTGCGCGGGGTGTTCCTGACGCCGGCGTTCTGGGCGCCGCAATCGCA CGCGACGCTCGTGAAGTCCCCGGTGGAAATGATTGTCGGCACGCTCAAGCAGTTCAACGTGCAGTACACCGACCCGACGC CGTTTGCCATCAAGTCTGCGCAGCTGGGGCAGAACCTACTGGCCCCGCCGAACGTGAAGGGCTGGCCCGGCGGCGATGCG TGGATCAACTCAACCACGCTGCTGGGGCGCAAGCAGTTTCTCGACCAATTGTTCCGCTCGACCGAGATGAAGCCGCCGCC CGGCACGCAACAGGCGCAACAGCAGAAGCCGGGCATGATGATGGCCGCAATGCGCGAAGACCTGAAGCAGGGTGGCACCG TGCAGGGCCTGGGCCAGGCGCTCAAGGGCATGGGGCAGGAGGGGCGCTTCAAGCTTGCGCAGTCGCAGACGATGGTGTCG TTCAACTCGGCCAAGTGGCTGGCGCAGTTCGGAGCGGATGGCGATGATCCGCCGCAACTGGCGCCGCGCATTTCGATCCA GCGTGCCGTGTTGCCCATCGAGCCGACTGCGCCGATTCCCGTCAAGCTGGCCGGTACGGCGTACCTGCGCACGCTGATGA TGGACCCGGCTTACCAGTTGAAGTAA
Upstream 100 bases:
>100_bases ACGCGGGATATCTACCACCGTGGCGGCTAGGTAGGGGGCCGAGGAACGGCGCACGAGTCGCTGCCCCGGCAAAGCAGTAG GGTCGTTTCGGGGGGCCGAC
Downstream 100 bases:
>100_bases CGCCACCGCCGCAGGAGCACACATCATGGAACGTCGCAATTTTCTGAAGGCCGGCGCCATGCTCGGCATGGGTGGCGCGG TGCCGGGGATTGTCTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK
Sequences:
>Translated_541_residues MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK >Mature_541_residues MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60115; Mature: 60115
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARI CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHH GFAPSESELDAYAGLTHREAVDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTAR CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSSSQKVPFAQLMYRQNVLLRQN HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC AVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKL HHHCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH WREFVSPDVDAAQALRVADAFRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVG HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH TLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDAWINSTTLLGRKQFLDQLFRS HHHHCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEE FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQL ECCHHHHHHHCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCC K C >Mature Secondary Structure MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARI CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHH GFAPSESELDAYAGLTHREAVDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTAR CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSSSQKVPFAQLMYRQNVLLRQN HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC AVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKL HHHCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH WREFVSPDVDAAQALRVADAFRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVG HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH TLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDAWINSTTLLGRKQFLDQLFRS HHHHCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEE FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQL ECCHHHHHHHCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA