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The map label for this gene is 187928967

Identifier: 187928967

GI number: 187928967

Start: 1986106

End: 1986885

Strand: Reverse

Name: 187928967

Synonym: Rpic_1886

Alternate gene names: NA

Gene position: 1986885-1986106 (Counterclockwise)

Preceding gene: 187928968

Following gene: 187928966

Centisome position: 50.4

GC content: 64.74

Gene sequence:

>780_bases
ATGCGCGCGACTTGCCGGCGCGCGCGCCCGTTGCTCGGCACCCTGGTCGACGTGCAGGCTGAAGGGCCGGAGGCGGAAGC
CGCCGTGGCGGCCGCGTTCGACGAGATGGCCGCTGTGCACGCATTGCTCACTTTTCATGCGAAGGACAGTGAACTGCAGG
CCATCAATCGCGCGGCGCCGGGTGAGAGGCTCATTGCAGATACTCGGACCCTTGCCGTTCTGCGCCTTGCGGCTGAACTG
CATATCGTGTCGGAGCGCGCATTCGATTGCCGTGTCGGCCCCCTCGACTTGCTCGCAGACAGGCGGTTTCCCATTTCCTT
CGACGGTGACATCGTCGTCAAAGAAACCTGCGCATACATGGATCTTGGAGGCATCGCCAAGGGTTTTGCGGTGGATTGTG
CGATCGAGGTGTTGCGCACCTTCGCGGTCGAGCGCGCGATCGTCAATGCCGGCGGCGACTTGCGCCACCACGGCGCCTGG
CCGATGTCGGTGCAGGTGCGTGACCCGCAAAACGCTGCCCGTGTTGCAACGTCTGTGCTGCTCGACAACGCGGCACTGGC
GAGTTCGACGGCTGCCGGTTTTGGCGCAGTCGCCGAAAGTGCATCCCGCATCCGCGATGCTCGCGGCAGGTTGCTGCCAC
CGCTTGCCGGTGCAACGGTGCAGGCACCCACCTGCATGCTGGCCGACGCGCTGACCAAAGTCGTGCTTGCCACTGGCGAT
GCAGCGCATCCGCTGTTGAGACGGTACGGCGGGGCTGTGGTCGTATACTCGCGAGCTTAG

Upstream 100 bases:

>100_bases
ACATCAACAACATCAGCGGAGCAACGTTGTCGTGCACGCATCTCACCGATGGCATCCGGCGCATTGCGGTGATGGCGCAG
TTGGCGCTCGTCCAGCGCTG

Downstream 100 bases:

>100_bases
CCGGCCGACAGTACTCCATGTCCGTTCCACCACGCTTCTCCCTCCATCTGCGCGAAAGCGCTTTTCGCCTTAGTCCGCGA
CGGCGCTGGCTGGTCTATGG

Product: ApbE family lipoprotein

Products: NA

Alternate protein names: ApbE Family Protein; ApbE-Like Lipoprotein; Thiamine Biosynthesis Lipoprotein ApbE Transmembrane; Thiamine Biosynthesis Lipoprotein APBE Transmembrane; Iron-Sulfur Cluster Assembly/Repair Protein ApbE; Abpe Family Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRATCRRARPLLGTLVDVQAEGPEAEAAVAAAFDEMAAVHALLTFHAKDSELQAINRAAPGERLIADTRTLAVLRLAAEL
HIVSERAFDCRVGPLDLLADRRFPISFDGDIVVKETCAYMDLGGIAKGFAVDCAIEVLRTFAVERAIVNAGGDLRHHGAW
PMSVQVRDPQNAARVATSVLLDNAALASSTAAGFGAVAESASRIRDARGRLLPPLAGATVQAPTCMLADALTKVVLATGD
AAHPLLRRYGGAVVVYSRA

Sequences:

>Translated_259_residues
MRATCRRARPLLGTLVDVQAEGPEAEAAVAAAFDEMAAVHALLTFHAKDSELQAINRAAPGERLIADTRTLAVLRLAAEL
HIVSERAFDCRVGPLDLLADRRFPISFDGDIVVKETCAYMDLGGIAKGFAVDCAIEVLRTFAVERAIVNAGGDLRHHGAW
PMSVQVRDPQNAARVATSVLLDNAALASSTAAGFGAVAESASRIRDARGRLLPPLAGATVQAPTCMLADALTKVVLATGD
AAHPLLRRYGGAVVVYSRA
>Mature_259_residues
MRATCRRARPLLGTLVDVQAEGPEAEAAVAAAFDEMAAVHALLTFHAKDSELQAINRAAPGERLIADTRTLAVLRLAAEL
HIVSERAFDCRVGPLDLLADRRFPISFDGDIVVKETCAYMDLGGIAKGFAVDCAIEVLRTFAVERAIVNAGGDLRHHGAW
PMSVQVRDPQNAARVATSVLLDNAALASSTAAGFGAVAESASRIRDARGRLLPPLAGATVQAPTCMLADALTKVVLATGD
AAHPLLRRYGGAVVVYSRA

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27273; Mature: 27273

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATCRRARPLLGTLVDVQAEGPEAEAAVAAAFDEMAAVHALLTFHAKDSELQAINRAAP
CCCCHHHHCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
GERLIADTRTLAVLRLAAELHIVSERAFDCRVGPLDLLADRRFPISFDGDIVVKETCAYM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHH
DLGGIAKGFAVDCAIEVLRTFAVERAIVNAGGDLRHHGAWPMSVQVRDPQNAARVATSVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
LDNAALASSTAAGFGAVAESASRIRDARGRLLPPLAGATVQAPTCMLADALTKVVLATGD
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AAHPLLRRYGGAVVVYSRA
HHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MRATCRRARPLLGTLVDVQAEGPEAEAAVAAAFDEMAAVHALLTFHAKDSELQAINRAAP
CCCCHHHHCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
GERLIADTRTLAVLRLAAELHIVSERAFDCRVGPLDLLADRRFPISFDGDIVVKETCAYM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHH
DLGGIAKGFAVDCAIEVLRTFAVERAIVNAGGDLRHHGAWPMSVQVRDPQNAARVATSVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
LDNAALASSTAAGFGAVAESASRIRDARGRLLPPLAGATVQAPTCMLADALTKVVLATGD
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AAHPLLRRYGGAVVVYSRA
HHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA