| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is prs [H]
Identifier: 187928793
GI number: 187928793
Start: 1802371
End: 1803276
Strand: Direct
Name: prs [H]
Synonym: Rpic_1710
Alternate gene names: 187928793
Gene position: 1802371-1803276 (Clockwise)
Preceding gene: 187928792
Following gene: 187928794
Centisome position: 45.72
GC content: 64.24
Gene sequence:
>906_bases ATGACGCCACTGATTTTTGCCATGCCGGGCAATGAAGCGATGGCAGAGAAGCTGGCTTCGGCGTTGGGCGCAGAGCGCGG GACTACGACGGTGCGGCGCTTTCCGGATGGAGAGTCGTATGTGCGGGTGGAGTCTGCCGTGGAGGGGCGGCGGGTCGCCA TCGTCTGCACGCTAGACCGGCCGGACGACAAGCTGATTCCGTTGCTGCTGTTGGCGGCGGCCGCCCGGGAGAACGGTGCG ACCGACGTTGGTCTGGTCGCACCTTACCTCGCCTACATGCGACAGGATAGTTGCTTCCAGCCGGGTGAGACGGTGAGTGC ACGGCATTTTGCAGCCTGGTTGTCGCGTGGATTTGATTGGCTGGCAACAGTCGATCCCCACTTGCACCGCATCACCAAGT TGTCGCAGGTCTATGTAATCCCAACGCGTCACGTCCACGCGGCGCCGGCTGTGGCGGCATGGCTGCGCGCCCATGTGACA CGCCCGGCGCTTGTGGGCCCTGACGAGGAGAGCAACCAATGGGTGGCCGATGTCGCAAGCAGGGCGGACGCGCCCATGGT GGTGCTGCACAAGGTCCGCAAAGGTGACCGGGATGTCGAGGTTTCGGTGCCGGATGTGGAGCGCTGGCGCGACCACACGC CGGTGCTGGTCGATGACATTGTCTCCACCGGTCGCACGATGGCCGAGACCATTGGTCATCTGCGGCGCGCGGGCTTGGCC GCGCCTGTGTGCATCGCGATTCACGCGGTGTTTTCAGGCAACGCGGTTCAGGATTTGGAGTCCACTGGGGCCGGGCTGGT GGTGAGCTGCGACACGGTTGTCCATCCCACCAATGGAATCTCCGTTGCCCCGGACCTAGCGTCCGCGGTTCGTGAACTCA TGCAAGACCCCGGGGGTGCCACATGA
Upstream 100 bases:
>100_bases GTATGCCGCTGTTCACCGTGCATGCCGAAGCGCTCGGCGAGTTGGACTACGCGTTCGACTACCTGGAGGCTCACCCGCTG ATCGATGTGGGAGATTCGAG
Downstream 100 bases:
>100_bases GTGCCAAGACTCCGCACGTTCACTTCGAGATAGATCTGGCCGGATTTTGCAAAGCCGCGATTCCGATGTCGGGTTGGCGC TTCATCGTGTCAATTGGCGG
Product: phosphoribosylpyrophosphate synthetase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTPLIFAMPGNEAMAEKLASALGAERGTTTVRRFPDGESYVRVESAVEGRRVAIVCTLDRPDDKLIPLLLLAAAARENGA TDVGLVAPYLAYMRQDSCFQPGETVSARHFAAWLSRGFDWLATVDPHLHRITKLSQVYVIPTRHVHAAPAVAAWLRAHVT RPALVGPDEESNQWVADVASRADAPMVVLHKVRKGDRDVEVSVPDVERWRDHTPVLVDDIVSTGRTMAETIGHLRRAGLA APVCIAIHAVFSGNAVQDLESTGAGLVVSCDTVVHPTNGISVAPDLASAVRELMQDPGGAT
Sequences:
>Translated_301_residues MTPLIFAMPGNEAMAEKLASALGAERGTTTVRRFPDGESYVRVESAVEGRRVAIVCTLDRPDDKLIPLLLLAAAARENGA TDVGLVAPYLAYMRQDSCFQPGETVSARHFAAWLSRGFDWLATVDPHLHRITKLSQVYVIPTRHVHAAPAVAAWLRAHVT RPALVGPDEESNQWVADVASRADAPMVVLHKVRKGDRDVEVSVPDVERWRDHTPVLVDDIVSTGRTMAETIGHLRRAGLA APVCIAIHAVFSGNAVQDLESTGAGLVVSCDTVVHPTNGISVAPDLASAVRELMQDPGGAT >Mature_300_residues TPLIFAMPGNEAMAEKLASALGAERGTTTVRRFPDGESYVRVESAVEGRRVAIVCTLDRPDDKLIPLLLLAAAARENGAT DVGLVAPYLAYMRQDSCFQPGETVSARHFAAWLSRGFDWLATVDPHLHRITKLSQVYVIPTRHVHAAPAVAAWLRAHVTR PALVGPDEESNQWVADVASRADAPMVVLHKVRKGDRDVEVSVPDVERWRDHTPVLVDDIVSTGRTMAETIGHLRRAGLAA PVCIAIHAVFSGNAVQDLESTGAGLVVSCDTVVHPTNGISVAPDLASAVRELMQDPGGAT
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=276, Percent_Identity=29.7101449275362, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI84875539, Length=280, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI4506129, Length=277, Percent_Identity=28.158844765343, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI28557709, Length=276, Percent_Identity=28.9855072463768, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1787458, Length=276, Percent_Identity=28.9855072463768, Blast_Score=96, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17554704, Length=304, Percent_Identity=25, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25149168, Length=300, Percent_Identity=24.6666666666667, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17554702, Length=300, Percent_Identity=24.6666666666667, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989924, Length=300, Percent_Identity=24.6666666666667, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319403, Length=294, Percent_Identity=27.2108843537415, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321776, Length=267, Percent_Identity=25.0936329588015, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6320946, Length=307, Percent_Identity=25.0814332247557, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355239, Length=282, Percent_Identity=28.3687943262411, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI45551540, Length=305, Percent_Identity=26.5573770491803, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 32321; Mature: 32190
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLIFAMPGNEAMAEKLASALGAERGTTTVRRFPDGESYVRVESAVEGRRVAIVCTLDR CCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEHHHCCCCEEEEEEEECC PDDKLIPLLLLAAAARENGATDVGLVAPYLAYMRQDSCFQPGETVSARHFAAWLSRGFDW CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE LATVDPHLHRITKLSQVYVIPTRHVHAAPAVAAWLRAHVTRPALVGPDEESNQWVADVAS EEECCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH RADAPMVVLHKVRKGDRDVEVSVPDVERWRDHTPVLVDDIVSTGRTMAETIGHLRRAGLA CCCCCHHHHHHHHCCCCCEEEECCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC APVCIAIHAVFSGNAVQDLESTGAGLVVSCDTVVHPTNGISVAPDLASAVRELMQDPGGA CHHHHHHHHHHCCCHHHHHHHCCCCEEEEECEEEECCCCCEECHHHHHHHHHHHHCCCCC T C >Mature Secondary Structure TPLIFAMPGNEAMAEKLASALGAERGTTTVRRFPDGESYVRVESAVEGRRVAIVCTLDR CCEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEHHHCCCCEEEEEEEECC PDDKLIPLLLLAAAARENGATDVGLVAPYLAYMRQDSCFQPGETVSARHFAAWLSRGFDW CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE LATVDPHLHRITKLSQVYVIPTRHVHAAPAVAAWLRAHVTRPALVGPDEESNQWVADVAS EEECCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH RADAPMVVLHKVRKGDRDVEVSVPDVERWRDHTPVLVDDIVSTGRTMAETIGHLRRAGLA CCCCCHHHHHHHHCCCCCEEEECCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC APVCIAIHAVFSGNAVQDLESTGAGLVVSCDTVVHPTNGISVAPDLASAVRELMQDPGGA CHHHHHHHHHHCCCHHHHHHHCCCCEEEEECEEEECCCCCEECHHHHHHHHHHHHCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]