Click here to switch to the map view.

The map label for this gene is 187928728

Identifier: 187928728

GI number: 187928728

Start: 1729172

End: 1729510

Strand: Reverse

Name: 187928728

Synonym: Rpic_1645

Alternate gene names: NA

Gene position: 1729510-1729172 (Counterclockwise)

Preceding gene: 187928729

Following gene: 187928725

Centisome position: 43.87

GC content: 59.59

Gene sequence:

>339_bases
ATGAACTACGTTTCCGCTGTTGTATTCGCCCTGACGCTGGCGTCGACTCCAGCCGCCTTTGCGGCCACGCCGATGGAAGG
TATGGACATGAAGCCTGCTGGTCAAACCAAGCAGGCGCCCAAGCCCGTGGCAGCAGAGGTCCGCAAGATCTACCTCGACA
CCGGCAAGGTCACGCTTAAGCACGGCGCCATCGACAATCTCGGCATGGGCGCCATGACGATGACGTTTGCCGTCAAGGAC
AAGGCATCACTGCAGCACTTCAAGGAGGGCCAAGCGGTGTGGGCCGTCTTTGATATGGTCGACGGTCAGCCGACCGTCGT
CGATTTGCGGAGCAAGTAA

Upstream 100 bases:

>100_bases
TGCTGTCCCTGTTTGTCGTTCCTGCTGTCTACCTGCTGCTGCGCAGGCGTGGCAGCGGGCAATCCATTCCCCAACCACCC
TCTCATGACAAGGTCTCACG

Downstream 100 bases:

>100_bases
ACCCTCGGCGGCGCACGGCCCATCGGTCGTGCGCCGCTGCATGCTGCGGAATCAGCCAGAAAGTCCCTTCACGAGGGCGC
CTTGTCGTGACATCAATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Periplasmic Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNYVSAVVFALTLASTPAAFAATPMEGMDMKPAGQTKQAPKPVAAEVRKIYLDTGKVTLKHGAIDNLGMGAMTMTFAVKD
KASLQHFKEGQAVWAVFDMVDGQPTVVDLRSK

Sequences:

>Translated_112_residues
MNYVSAVVFALTLASTPAAFAATPMEGMDMKPAGQTKQAPKPVAAEVRKIYLDTGKVTLKHGAIDNLGMGAMTMTFAVKD
KASLQHFKEGQAVWAVFDMVDGQPTVVDLRSK
>Mature_112_residues
MNYVSAVVFALTLASTPAAFAATPMEGMDMKPAGQTKQAPKPVAAEVRKIYLDTGKVTLKHGAIDNLGMGAMTMTFAVKD
KASLQHFKEGQAVWAVFDMVDGQPTVVDLRSK

Specific function: Unknown

COG id: COG5569

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11960; Mature: 11960

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVSAVVFALTLASTPAAFAATPMEGMDMKPAGQTKQAPKPVAAEVRKIYLDTGKVTLK
CCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEE
HGAIDNLGMGAMTMTFAVKDKASLQHFKEGQAVWAVFDMVDGQPTVVDLRSK
CCCCCCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEEECCCCCCEEEEECCC
>Mature Secondary Structure
MNYVSAVVFALTLASTPAAFAATPMEGMDMKPAGQTKQAPKPVAAEVRKIYLDTGKVTLK
CCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEE
HGAIDNLGMGAMTMTFAVKDKASLQHFKEGQAVWAVFDMVDGQPTVVDLRSK
CCCCCCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA